RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 LIG4P49917 911 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 PRAMEP78395 509 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 GNA12Q03113 381 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 PRKG1Q13976 671 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 LSM12Q3MHD2 195 aaKnown RBP14.59□□□□□ -0.07
RLIM-202ENST00000349225 FSCBQ5H9T9 825 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 PGAM4Q8N0Y7 254 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 ADAMTS16Q8TE57 1224 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 TRPC4APQ8TEL6 797 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 STARD8Q92502 1023 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 NPAS2Q99743 824 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 MUC3BQ9H195 1237 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 CXorf21Q9HAI6 301 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 TCF7L2Q9NQB0 619 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 ITGB1BP2Q9UKP3 347 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 SLC8A2Q9UPR5 921 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 KRBA1A5PL33 1030 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 ZNF701M0R085 212 aaPredicted RBP14.59□□□□□ -0.07
RLIM-202ENST00000349225 METTL18O95568 372 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 CHRNGP07510 517 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 MIPP30301 263 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 ETFBP38117 255 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 RAB15P59190 212 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 CNTN2Q02246 1040 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 TREML2Q5T2D2 321 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 NEPROQ6NW34 567 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 C16orf87Q6PH81 154 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 DLG3Q92796 817 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 CASP10Q92851 521 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 CNDP1Q96KN2 507 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 PGLYRP2Q96PD5 576 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 EBNA1BP2Q99848 306 aaKnown RBP14.59□□□□□ -0.07
RLIM-202ENST00000349225 ZFYVE28Q9HCC9 887 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 XPNPEP3Q9NQH7 507 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 GGA1Q9UJY5 639 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 GIT1Q9Y2X7 761 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 HES2Q9Y543 173 aa14.59□□□□□ -0.07
RLIM-202ENST00000349225 H0YJX3 145 aa14.58□□□□□ -0.07
RLIM-202ENST00000349225 AQP9O43315 295 aa14.58□□□□□ -0.07
RLIM-202ENST00000349225 GLRA3O75311 464 aa14.58□□□□□ -0.07
RLIM-202ENST00000349225 CST3P01034 146 aaPredicted RBP14.58□□□□□ -0.07
RLIM-202ENST00000349225 ZNF182P17025 639 aaPredicted RBP14.58□□□□□ -0.07
RLIM-202ENST00000349225 PAX3P23760 479 aa14.58□□□□□ -0.07
RLIM-202ENST00000349225 GRK2P25098 689 aa14.58□□□□□ -0.07
RLIM-202ENST00000349225 MAPK10P53779 464 aa14.58□□□□□ -0.07
RLIM-202ENST00000349225 RAB39AQ14964 217 aa14.58□□□□□ -0.07
RLIM-202ENST00000349225 XKR9Q5GH70 373 aa14.58□□□□□ -0.07
RLIM-202ENST00000349225 DEPDC1Q5TB30 811 aa14.58□□□□□ -0.07
RLIM-202ENST00000349225 TPK1Q9H3S4 243 aa14.58□□□□□ -0.07
RLIM-202ENST00000349225 SFMBT1Q9UHJ3 866 aa14.58□□□□□ -0.07
RLIM-202ENST00000349225 SLX4Q8IY92 1834 aa14.58□□□□□ -0.07
RLIM-202ENST00000349225 TRIM64A6NGJ6 449 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.58□□□□□ -0.08
RLIM-202ENST00000349225 BAIAP3O94812 1187 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 KRT7P08729 469 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 DCKP27707 260 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 EPHX2P34913 555 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 DMP1Q13316 513 aaPredicted RBP14.58□□□□□ -0.08
RLIM-202ENST00000349225 SLC7A3Q8WY07 619 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 TFAP2CQ92754 450 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 ZBTB45Q96K62 511 aaPredicted RBP14.58□□□□□ -0.08
RLIM-202ENST00000349225 GBA3Q9H227 469 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 NOL11Q9H8H0 719 aaKnown RBP14.58□□□□□ -0.08
RLIM-202ENST00000349225 PIH1D1Q9NWS0 290 aaKnown RBP14.58□□□□□ -0.08
RLIM-202ENST00000349225 PCDHA11Q9Y5I1 949 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 QSER1Q2KHR3 1735 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 H7C0C1 242 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 VAPBO95292 243 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 ATP5OP48047 213 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 DPYSQ14117 519 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 NR1D2Q14995 579 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 SEZ6Q53EL9 994 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 THOC7Q6I9Y2 204 aaKnown RBP14.58□□□□□ -0.08
RLIM-202ENST00000349225 RSBN1LQ6PCB5 846 aaPredicted RBP14.58□□□□□ -0.08
RLIM-202ENST00000349225 ACDQ96AP0 544 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 ERGIC3Q9Y282 383 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 AP4S1Q9Y587 144 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 NOX1Q9Y5S8 564 aa14.58□□□□□ -0.08
RLIM-202ENST00000349225 GNPATO15228 680 aa14.57□□□□□ -0.08
RLIM-202ENST00000349225 CLIC3O95833 236 aa14.57□□□□□ -0.08
RLIM-202ENST00000349225 KRT3P12035 628 aa14.57□□□□□ -0.08
RLIM-202ENST00000349225 MPSTP25325 297 aa14.57□□□□□ -0.08
RLIM-202ENST00000349225 NIPAL4Q0D2K0 466 aa14.57□□□□□ -0.08
RLIM-202ENST00000349225 NME3Q13232 169 aa14.57□□□□□ -0.08
RLIM-202ENST00000349225 DENND1BQ6P3S1 775 aa14.57□□□□□ -0.08
RLIM-202ENST00000349225 CMC1Q7Z7K0 106 aa14.57□□□□□ -0.08
RLIM-202ENST00000349225 ZC3H7AQ8IWR0 971 aaKnown RBP14.57□□□□□ -0.08
RLIM-202ENST00000349225 SNX13Q9Y5W8 968 aa14.57□□□□□ -0.08
RLIM-202ENST00000349225 TCAF2A6NFQ2 919 aa14.57□□□□□ -0.08
RLIM-202ENST00000349225 AKAP10O43572 662 aa14.57□□□□□ -0.08
RLIM-202ENST00000349225 STAM2O75886 525 aa14.57□□□□□ -0.08
RLIM-202ENST00000349225 LYPLA2O95372 231 aa14.57□□□□□ -0.08
RLIM-202ENST00000349225 LTFP02788 710 aa14.57□□□□□ -0.08
RLIM-202ENST00000349225 PABPC1P11940 636 aaKnown RBP14.57□□□□□ -0.08
RLIM-202ENST00000349225 ZNF786Q8N393 782 aa14.57□□□□□ -0.08
RLIM-202ENST00000349225 RP9Q8TA86 221 aaKnown RBP14.57□□□□□ -0.08
RLIM-202ENST00000349225 TMA16Q96EY4 203 aaKnown RBP14.57□□□□□ -0.08
RLIM-202ENST00000349225 NTPCRQ9BSD7 190 aaKnown RBP14.57□□□□□ -0.08
RLIM-202ENST00000349225 SMOXQ9NWM0 555 aa14.57□□□□□ -0.08
RLIM-202ENST00000349225 GMPR2Q9P2T1 348 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms