RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 SETD3Q86TU7 594 aaPredicted RBP10.57□□□□□ -0.72
CHRNA1-202ENST00000348749 RP9Q8TA86 221 aaKnown RBP10.57□□□□□ -0.72
CHRNA1-202ENST00000348749 GSDMBQ8TAX9 411 aa10.57□□□□□ -0.72
CHRNA1-202ENST00000348749 TRUB1Q8WWH5 349 aaKnown RBP10.57□□□□□ -0.72
CHRNA1-202ENST00000348749 EFHD2Q96C19 240 aaPredicted RBP10.57□□□□□ -0.72
CHRNA1-202ENST00000348749 FAF2Q96CS3 445 aa10.57□□□□□ -0.72
CHRNA1-202ENST00000348749 KLHL32Q96NJ5 620 aa10.57□□□□□ -0.72
CHRNA1-202ENST00000348749 LENG8Q96PV6 779 aaPredicted RBP10.57□□□□□ -0.72
CHRNA1-202ENST00000348749 CDRT15Q96T59 188 aa10.57□□□□□ -0.72
CHRNA1-202ENST00000348749 TMEM79Q9BSE2 394 aa10.57□□□□□ -0.72
CHRNA1-202ENST00000348749 RPF2Q9H7B2 306 aaKnown RBP10.57□□□□□ -0.72
CHRNA1-202ENST00000348749 JPH1Q9HDC5 661 aaPredicted RBP10.57□□□□□ -0.72
CHRNA1-202ENST00000348749 SLC9A2Q9UBY0 812 aa10.57□□□□□ -0.72
CHRNA1-202ENST00000348749 SEPT9Q9UHD8 586 aaPredicted RBP10.57□□□□□ -0.72
CHRNA1-202ENST00000348749 AP4S1Q9Y587 144 aa10.57□□□□□ -0.72
CHRNA1-202ENST00000348749 CTDP1Q9Y5B0 961 aaPredicted RBP10.57□□□□□ -0.72
CHRNA1-202ENST00000348749 ZNF541Q9H0D2 1346 aa10.57□□□□□ -0.72
CHRNA1-202ENST00000348749 DOCK5Q9H7D0 1870 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 AVILO75366 819 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 LRCH4O75427 683 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 ATE1O95260 518 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 OXSR1O95747 527 aaPredicted RBP10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 NR3C2P08235 984 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 PIK3R1P27986 724 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 GABRB3P28472 473 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 ARL2P36404 184 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 MAGEA6P43360 314 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 ACOT2P49753 483 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 EIF2B2P49770 351 aaKnown RBP10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 OAZ1P54368 228 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 TGFB2P61812 414 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 CEACAM7Q14002 265 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 SEPT6Q14141 434 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 TFDP2Q14188 446 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 RFTN1Q14699 578 aaPredicted RBP10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 INAQ16352 499 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 N4BP2L1Q5TBK1 243 aaPredicted RBP10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 MROH9Q5TGP6 573 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 VWA5B1Q5TIE3 1220 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 GPAT2Q6NUI2 795 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 SWSAP1Q6NVH7 229 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 C16orf87Q6PH81 154 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 EEPD1Q7L9B9 569 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 LYSMD3Q7Z3D4 306 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 GRIN3AQ8TCU5 1115 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 RTP4Q96DX8 246 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 GMLQ99445 158 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 FERMT1Q9BQL6 677 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 DCUN1D5Q9BTE7 237 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 COQ10BQ9H8M1 238 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 RAVER2Q9HCJ3 691 aaKnown RBP10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 ATAD3AQ9NVI7 634 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 GID8Q9NWU2 228 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 PAK5Q9P286 719 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 IPO11Q9UI26 975 aaKnown RBP10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 PCDHB12Q9Y5F1 795 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 CDY2AQ9Y6F7 541 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 CDY1Q9Y6F8 540 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 SLC15A5A6NIM6 579 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 H3BMQ9 156 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 AIM2O14862 343 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 ATG7O95352 703 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 STAMBPO95630 424 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 TOP3BO95985 862 aaKnown RBP10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 MCF2P10911 925 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 KRT3P12035 628 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 YBX3P16989 372 aaKnown RBP eCLIP10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 PTPN1P18031 435 aaKnown RBP10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 UGT1A6P19224 532 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 UGT1A1P22309 533 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 UGT1A4P22310 534 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 ADSLP30566 484 aaPredicted RBP10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 ARRB2P32121 409 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 UGT1A3P35503 534 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 UGT1A5P35504 534 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 WNT7BP56706 349 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 ROR1Q01973 937 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 HERC3Q15034 1050 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 NOMO1Q15155 1222 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 INSCQ1MX18 579 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 RGS21Q2M5E4 152 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 OGFOD2Q6N063 350 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 MAMDC4Q6UXC1 1216 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 UNC5AQ6ZN44 842 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 CYS1Q717R9 158 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 NANOGNBQ7Z5D8 188 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 ZNF354CQ86Y25 554 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 SLC4A11Q8NBS3 891 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 NSUN6Q8TEA1 469 aaKnown RBP10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 COG8Q96MW5 612 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 HGH1Q9BTY7 390 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 CDH19Q9H159 772 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 COG4Q9H9E3 785 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 CISHQ9NSE2 258 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 NCKIPSDQ9NZQ3 722 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 DCDC2Q9UHG0 476 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 PGAP2Q9UHJ9 254 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 PACSIN3Q9UKS6 424 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 ERGIC3Q9Y282 383 aa10.56□□□□□ -0.72
CHRNA1-202ENST00000348749 SLC30A1Q9Y6M5 507 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms