RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 VAT1Q99536 393 aa23.55■■□□□ 1.36
NPAS3-201ENST00000346562 S100A13Q99584 98 aa23.55■■□□□ 1.36
NPAS3-201ENST00000346562 BDH2Q9BUT1 245 aa23.55■■□□□ 1.36
NPAS3-201ENST00000346562 POPDC2Q9HBU9 364 aa23.55■■□□□ 1.36
NPAS3-201ENST00000346562 MRPL17Q9NRX2 175 aaKnown RBP23.55■■□□□ 1.36
NPAS3-201ENST00000346562 CAMSAP1Q5T5Y3 1602 aa23.55■■□□□ 1.36
NPAS3-201ENST00000346562 LACTBL1A8MY62 500 aa23.55■■□□□ 1.36
NPAS3-201ENST00000346562 THOP1P52888 689 aa23.55■■□□□ 1.36
NPAS3-201ENST00000346562 RIOX1Q9H6W3 641 aa23.55■■□□□ 1.36
NPAS3-201ENST00000346562 ZNF112Q9UJU3 913 aa23.55■■□□□ 1.36
NPAS3-201ENST00000346562 INO80Q9ULG1 1556 aaPredicted RBP23.55■■□□□ 1.36
NPAS3-201ENST00000346562 KPNA3O00505 521 aaPredicted RBP23.55■■□□□ 1.36
NPAS3-201ENST00000346562 ERN1O75460 977 aaKnown RBP23.55■■□□□ 1.36
NPAS3-201ENST00000346562 MGAT1P26572 445 aa23.55■■□□□ 1.36
NPAS3-201ENST00000346562 ZPBP2Q6X784 338 aa23.55■■□□□ 1.36
NPAS3-201ENST00000346562 SMNDC1O75940 238 aaKnown RBP eCLIP23.54■■□□□ 1.36
NPAS3-201ENST00000346562 AKAP3O75969 853 aa23.54■■□□□ 1.36
NPAS3-201ENST00000346562 DGKAP23743 735 aa23.54■■□□□ 1.36
NPAS3-201ENST00000346562 MMP13P45452 471 aa23.54■■□□□ 1.36
NPAS3-201ENST00000346562 SOX10P56693 466 aa23.54■■□□□ 1.36
NPAS3-201ENST00000346562 ACVR2BQ13705 512 aa23.54■■□□□ 1.36
NPAS3-201ENST00000346562 OASLQ15646 514 aaKnown RBP23.54■■□□□ 1.36
NPAS3-201ENST00000346562 PROX1Q92786 737 aa23.54■■□□□ 1.36
NPAS3-201ENST00000346562 OMDQ99983 421 aa23.54■■□□□ 1.36
NPAS3-201ENST00000346562 TMCO1Q9UM00 188 aa23.54■■□□□ 1.36
NPAS3-201ENST00000346562 ACKR2O00590 384 aa23.54■■□□□ 1.36
NPAS3-201ENST00000346562 PEX1O43933 1283 aa23.54■■□□□ 1.36
NPAS3-201ENST00000346562 ZNF470Q6ECI4 717 aa23.54■■□□□ 1.36
NPAS3-201ENST00000346562 AGMOQ6ZNB7 445 aa23.54■■□□□ 1.36
NPAS3-201ENST00000346562 RNASE11Q8TAA1 199 aaKnown RBP23.54■■□□□ 1.36
NPAS3-201ENST00000346562 ACTL9Q8TC94 416 aa23.54■■□□□ 1.36
NPAS3-201ENST00000346562 LRRC4BQ9NT99 713 aa23.54■■□□□ 1.36
NPAS3-201ENST00000346562 ZNF862O60290 1169 aa23.54■■□□□ 1.36
NPAS3-201ENST00000346562 CXCL9Q07325 125 aa23.54■■□□□ 1.36
NPAS3-201ENST00000346562 OSGEPQ9NPF4 335 aa23.54■■□□□ 1.36
NPAS3-201ENST00000346562 POLR1EQ9GZS1 481 aaKnown RBP23.54■■□□□ 1.36
NPAS3-201ENST00000346562 SF3B1O75533 1304 aaKnown RBP eCLIP23.54■■□□□ 1.36
NPAS3-201ENST00000346562 TOMM20Q15388 145 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 FGD3Q5JSP0 725 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 SETD9Q8NE22 299 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 TATDN2Q93075 761 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 AP3M1Q9Y2T2 418 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 POLR1AO95602 1720 aaPredicted RBP23.53■■□□□ 1.36
NPAS3-201ENST00000346562 BTN3A1O00481 513 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 CSDE1O75534 798 aaKnown RBP23.53■■□□□ 1.36
NPAS3-201ENST00000346562 CRY1Q16526 586 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 CES5AQ6NT32 575 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 SLC2A14Q8TDB8 520 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 UNKQ9C0B0 810 aaKnown RBP23.53■■□□□ 1.36
NPAS3-201ENST00000346562 CAPN1P07384 714 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 MYL12AP19105 171 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 CLK2P49760 499 aaKnown RBP23.53■■□□□ 1.36
NPAS3-201ENST00000346562 PSMD7P51665 324 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 FASTKQ14296 549 aaKnown RBP23.53■■□□□ 1.36
NPAS3-201ENST00000346562 IQSEC1Q6DN90 963 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 SLC30A10Q6XR72 485 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 C3orf67Q6ZVT6 689 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 DHFR2Q86XF0 187 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 OPTCQ9UBM4 332 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 TRAV19A0A0A6YYK7 116 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 LINC00854A0A1B0GVQ3 168 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 CHURC1-FNTBB4DL54 471 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 YBX3P16989 372 aaKnown RBP eCLIP23.53■■□□□ 1.36
NPAS3-201ENST00000346562 COLGALT2Q8IYK4 626 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 METTL6Q8TCB7 284 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 KLHL1Q9NR64 748 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 RABGEF1Q9UJ41 708 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 PIPSLA2A3N6 862 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 LTFP02788 710 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 FMO4P31512 558 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 TRIQKQ629K1 86 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 DEFB106AQ8N104 65 aa23.53■■□□□ 1.36
NPAS3-201ENST00000346562 SALL1Q9NSC2 1324 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 FGF10O15520 208 aaPredicted RBP23.52■■□□□ 1.36
NPAS3-201ENST00000346562 PTPN4P29074 926 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 ACAP1Q15027 740 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 WDR93Q6P2C0 686 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 MFSD7Q6UXD7 560 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 SYT12Q8IV01 421 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 APOPT1Q96IL0 206 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 CEP41Q9BYV8 373 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 CATSPERZQ9NTU4 200 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 TLX1P31314 330 aaPredicted RBP23.52■■□□□ 1.36
NPAS3-201ENST00000346562 CLK3P49761 638 aaKnown RBP23.52■■□□□ 1.36
NPAS3-201ENST00000346562 GCNT1Q02742 428 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 ZNHIT3Q15649 155 aaPredicted RBP23.52■■□□□ 1.36
NPAS3-201ENST00000346562 RSBN1Q5VWQ0 802 aaPredicted RBP23.52■■□□□ 1.36
NPAS3-201ENST00000346562 SCAIQ8N9R8 606 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 ZNF606Q8WXB4 792 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 ZMYM5Q9UJ78 669 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 TRIM17Q9Y577 477 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 ANKDD1BA6NHY2 528 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 DNALI1O14645 258 aaPredicted RBP23.52■■□□□ 1.36
NPAS3-201ENST00000346562 PSMB9P28065 219 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 UBE2E3Q969T4 207 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 FAM126AQ9BYI3 521 aaPredicted RBP23.52■■□□□ 1.36
NPAS3-201ENST00000346562 ARIH1Q9Y4X5 557 aaPredicted RBP23.52■■□□□ 1.36
NPAS3-201ENST00000346562 DIP2AQ14689 1571 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 CLTCQ00610 1675 aaKnown RBP23.52■■□□□ 1.36
NPAS3-201ENST00000346562 AMPD1P23109 780 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms