RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 CHPFQ8IZ52 775 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 PGBD3Q8N328 593 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 TRIM58Q8NG06 486 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 RXFP2Q8WXD0 754 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 TMA16Q96EY4 203 aaKnown RBP14.26□□□□□ -0.13
TPM4-202ENST00000344824 CIPCQ9C0C6 399 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 EPC1Q9H2F5 836 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 POLMQ9NP87 494 aaPredicted RBP14.26□□□□□ -0.13
TPM4-202ENST00000344824 TMEM59LQ9UK28 342 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 GMEB2Q9UKD1 530 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 CLEC4EQ9ULY5 219 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 NUP205Q92621 2012 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 ZNF292O60281 2723 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 RPP40O75818 363 aaKnown RBP14.25□□□□□ -0.13
TPM4-202ENST00000344824 ALDH1A2O94788 518 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 IGLV3-27P01718 113 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 HOXB2P14652 356 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 PDGFRAP16234 1089 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 HOXD9P28356 352 aaPredicted RBP14.25□□□□□ -0.13
TPM4-202ENST00000344824 SLC6A4P31645 630 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 SSR1P43307 286 aaKnown RBP14.25□□□□□ -0.13
TPM4-202ENST00000344824 SULT1E1P49888 294 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 HADHBP55084 474 aaKnown RBP14.25□□□□□ -0.13
TPM4-202ENST00000344824 ETF1P62495 437 aaKnown RBP14.25□□□□□ -0.13
TPM4-202ENST00000344824 RING1Q06587 406 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 ZNF252P-AS1Q0IIN9 211 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 CRY1Q16526 586 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 CDO1Q16878 200 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 GEN1Q17RS7 908 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 DNTTIP2Q5QJE6 756 aaKnown RBP14.25□□□□□ -0.13
TPM4-202ENST00000344824 RAP1GAP2Q684P5 730 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 TMEM92Q6UXU6 159 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 FAM217AQ8IXS0 508 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 ABCA7Q8IZY2 2146 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 CAMKK1Q8N5S9 505 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 LRRC57Q8N9N7 239 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 SUMF1Q8NBK3 374 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 HMGB4Q8WW32 186 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 CFAP57Q96MR6 1250 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 ASNSD1Q9NWL6 643 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 CACNA2D2Q9NY47 1150 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 IP6K2Q9UHH9 426 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 PACSIN2Q9UNF0 486 aaPredicted RBP14.25□□□□□ -0.13
TPM4-202ENST00000344824 INVSQ9Y283 1065 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 RAD54BQ9Y620 910 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 CKAP5Q14008 2032 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 PLXND1Q9Y4D7 1925 aa14.25□□□□□ -0.13
TPM4-202ENST00000344824 C2CD4BA6NLJ0 364 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 ENC1O14682 589 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 HRO43593 1189 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 SPOPO43791 374 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 PROSCO94903 275 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 GLI1P08151 1106 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 CISD3P0C7P0 127 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 HNRNPLP14866 589 aaKnown RBP eCLIP14.24□□□□□ -0.13
TPM4-202ENST00000344824 COMTP21964 271 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 CASQ1P31415 396 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 GBP1P32455 592 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 GJC1P36383 396 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 SCNN1AP37088 669 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 ATP11AP98196 1134 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 NNTQ13423 1086 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 C15orf59Q2T9L4 293 aaPredicted RBP14.24□□□□□ -0.13
TPM4-202ENST00000344824 FAM133BQ5BKY9 247 aaKnown RBP14.24□□□□□ -0.13
TPM4-202ENST00000344824 NADSYN1Q6IA69 706 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 SDE2Q6IQ49 451 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 C11orf63Q6NUN7 778 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 PEX26Q7Z412 305 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 CCDC117Q8IWD4 279 aaPredicted RBP14.24□□□□□ -0.13
TPM4-202ENST00000344824 SYCE1Q8N0S2 351 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 LGI2Q8N0V4 545 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 CARNMT1Q8N4J0 409 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 DCLK2Q8N568 766 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 ATP6V0D2Q8N8Y2 350 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 HJURPQ8NCD3 748 aaPredicted RBP14.24□□□□□ -0.13
TPM4-202ENST00000344824 UCMAQ8WVF2 138 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 PRICKLE1Q96MT3 831 aaPredicted RBP14.24□□□□□ -0.13
TPM4-202ENST00000344824 SLC2A13Q96QE2 648 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 ACOX2Q99424 681 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 DDX50Q9BQ39 737 aaKnown RBP14.24□□□□□ -0.13
TPM4-202ENST00000344824 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.24□□□□□ -0.131e-7■■■■■ 26.8
TPM4-202ENST00000344824 XPO7Q9UIA9 1087 aaKnown RBP14.24□□□□□ -0.13
TPM4-202ENST00000344824 MUC22E2RYF6 1773 aaPredicted RBP14.24□□□□□ -0.13
TPM4-202ENST00000344824 M0QYT0 321 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 ADAM23O75077 832 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 NTSR1P30989 418 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 SDC4P31431 198 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 CNR2P34972 360 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 GGCXP38435 758 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 HSF5Q4G112 596 aaPredicted RBP14.24□□□□□ -0.13
TPM4-202ENST00000344824 PIK3R6Q5UE93 754 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 BEND5Q7L4P6 421 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 MFN1Q8IWA4 741 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 MDGA1Q8NFP4 955 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 GAB3Q8WWW8 586 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 RUBCNQ92622 972 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 SLC39A13Q96H72 371 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 CALR3Q96L12 384 aaKnown RBP14.24□□□□□ -0.13
TPM4-202ENST00000344824 ABCB8Q9NUT2 735 aa14.24□□□□□ -0.13
TPM4-202ENST00000344824 SLC12A6Q9UHW9 1150 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms