RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 RAB41Q5JT25 222 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 PKN3Q6P5Z2 889 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 DRICH1Q6PGQ1 229 aaPredicted RBP13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 STRADAQ7RTN6 431 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 KBTBD6Q86V97 674 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 TTC13Q8NBP0 860 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 ATL2Q8NHH9 583 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 CLEC4CQ8WTT0 213 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 C1orf54Q8WWF1 131 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 CENPIQ92674 756 aaPredicted RBP13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 PSMG2Q969U7 264 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 ZC3H10Q96K80 434 aaKnown RBP13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 CFAP57Q96MR6 1250 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 PGLYRP2Q96PD5 576 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 PEBP4Q96S96 227 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 SMOQ99835 787 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 HEMGNQ9BXL5 484 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 CSNK1G1Q9HCP0 422 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 PNPLA8Q9NP80 782 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.96□□□□□ -0.182e-11■■■■□ 20.8
HERPUD1-202ENST00000344114 PCSK1NQ9UHG2 260 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 RALYQ9UKM9 306 aaKnown RBP13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 OBSL1O75147 1896 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 ANAPC1Q9H1A4 1944 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 MTMR11A4FU01 709 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 OR6C75A6NL08 312 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 ZNF487B1APH4 448 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 DAPK3O43293 454 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 BEST1O76090 585 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 ENDOD1O94919 500 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 PRAMEF12O95522 483 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 FGF19O95750 216 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 ECHS1P30084 290 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 MATKP42679 507 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 ALDH1A3P47895 512 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 TNK2Q07912 1038 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 PTK6Q13882 451 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 PDK2Q15119 407 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 PPP1R7Q15435 360 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 TAF5Q15542 800 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 KAZNQ674X7 775 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 C4orf50Q6ZRC1 276 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 BBS12Q6ZW61 710 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 CYP4V2Q6ZWL3 525 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 ANKS1BQ7Z6G8 1248 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 DNAJB7Q7Z6W7 309 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 MAP7D3Q8IWC1 876 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 SCML4Q8N228 414 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 BPIFB1Q8TDL5 484 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 TMEM209Q96SK2 561 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 DPH5Q9H2P9 285 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 ATXN3LQ9H3M9 355 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 DMAP1Q9NPF5 467 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 CNGB3Q9NQW8 809 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 HSFX1Q9UBD0 423 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 STAP1Q9ULZ2 295 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 HPCAL4Q9UM19 191 aa13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 R3HDM2Q9Y2K5 976 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-202ENST00000344114 SDK1Q7Z5N4 2213 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 LIASO43766 372 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 KRT10P13645 584 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 GABRR2P28476 465 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 NOS2P35228 1153 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 TKTL1P51854 596 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 HDAC4P56524 1084 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 DAOAP59103 153 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 ATP11AP98196 1134 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 LLGL1Q15334 1064 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 ITPRIPL2Q3MIP1 535 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 ARHGAP15Q53QZ3 475 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 TMEM196Q5HYL7 178 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 GPR158Q5T848 1215 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 KCTD6Q8NC69 237 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 ZMIZ2Q8NF64 920 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 OR10T2Q8NGX3 314 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 ATG4AQ8WYN0 398 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 IRGQQ8WZA9 623 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 HSPH1Q92598 858 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 FAM149B1Q96BN6 582 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 LRRC45Q96CN5 670 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 CHFRQ96EP1 664 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 CCDC114Q96M63 670 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 SLC2A13Q96QE2 648 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 SMOC1Q9H4F8 434 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 SLC27A5Q9Y2P5 690 aa13.94□□□□□ -0.18
HERPUD1-202ENST00000344114 ATG2BQ96BY7 2078 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 HHLA1C9JL84 531 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 HSPA9P38646 679 aaKnown RBP13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 MPLP40238 635 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 KCNJ1P48048 391 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 PXNP49023 591 aaPredicted RBP13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 SULT1E1P49888 294 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 ARSEP51690 589 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 CDH6P55285 790 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 YWHAZP63104 245 aaKnown RBP13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 SNX1Q13596 522 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 KRT81Q14533 505 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 SLC25A52Q3SY17 297 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 KCNT1Q5JUK3 1230 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms