RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 NOS1APO75052 506 aaPredicted RBP17.95■□□□□ 0.46
SMAD4-201ENST00000342988 GNRH1P01148 92 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 CDC25AP30304 524 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 AXLP30530 894 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 POLR2LP62875 67 aaKnown RBP17.95■□□□□ 0.46
SMAD4-201ENST00000342988 PPM1LQ5SGD2 360 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 UBE2Q1Q7Z7E8 422 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 SSH3Q8TE77 659 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 KNL1Q8NG31 2342 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 NR4A1P22736 598 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 SCNN1BP51168 640 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 EPC2Q52LR7 807 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 FAM126BQ8IXS8 530 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 POC5Q8NA72 575 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 RNF149Q8NC42 400 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 NEDD4LQ96PU5 975 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 TBC1D13Q9NVG8 400 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 MRTO4Q9UKD2 239 aaKnown RBP17.94■□□□□ 0.46
SMAD4-201ENST00000342988 PCDHB2Q9Y5E7 798 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 GRAP2O75791 330 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 PRKCBP05771 671 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 ITGA4P13612 1032 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 SLC2A4P14672 509 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 PTPN4P29074 926 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 RIOK2Q9BVS4 552 aaKnown RBP17.94■□□□□ 0.46
SMAD4-201ENST00000342988 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.94■□□□□ 0.46
SMAD4-201ENST00000342988 IKZF3Q9UKT9 509 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 DAGLAQ9Y4D2 1042 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 METTL18O95568 372 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 PTX3P26022 381 aaPredicted RBP17.94■□□□□ 0.46
SMAD4-201ENST00000342988 MAGEA12P43365 314 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 SLC25A25Q6KCM7 469 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 ZFP28Q8NHY6 868 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 YME1L1Q96TA2 773 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 XKR8Q9H6D3 395 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 PCDHGC5Q9Y5F6 944 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 SPAG17Q6Q759 2223 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 RPL4P36578 427 aaKnown RBP17.94■□□□□ 0.46
SMAD4-201ENST00000342988 GSSP48637 474 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 POU5F1Q01860 360 aaKnown RBP17.94■□□□□ 0.46
SMAD4-201ENST00000342988 SULT1C3Q6IMI6 304 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 STK32CQ86UX6 486 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 EMC1Q8N766 993 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 SLC30A5Q8TAD4 765 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 PRRG4Q9BZD6 226 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 ISCUQ9H1K1 167 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 ANKZF1Q9H8Y5 726 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 ITIH6Q6UXX5 1313 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 CPA3P15088 417 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 RDH8Q9NYR8 311 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 HBS1LQ9Y450 684 aaKnown RBP17.94■□□□□ 0.46
SMAD4-201ENST00000342988 RPLP2P05387 115 aaKnown RBP17.94■□□□□ 0.46
SMAD4-201ENST00000342988 PTPN21Q16825 1174 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 TTLL2Q9BWV7 592 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 TRMT13Q9NUP7 481 aaKnown RBP17.94■□□□□ 0.46
SMAD4-201ENST00000342988 KIAA1257Q9ULG3 409 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 URADA6NGE7 173 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 ZNF37AP17032 561 aaPredicted RBP17.94■□□□□ 0.46
SMAD4-201ENST00000342988 ECHS1P30084 290 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 SDC2P34741 201 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 HSDL1Q3SXM5 330 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 ZNF613Q6PF04 617 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 ZNF548Q8NEK5 533 aaPredicted RBP17.94■□□□□ 0.46
SMAD4-201ENST00000342988 ABCB10Q9NRK6 738 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 NDOR1Q9UHB4 597 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 ITSN1Q15811 1721 aa17.94■□□□□ 0.46
SMAD4-201ENST00000342988 FBLN1P23142 703 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 MAPK9P45984 424 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 CITED4Q96RK1 184 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 IFT46Q9NQC8 304 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 VANGL2Q9ULK5 521 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 AGAP1Q9UPQ3 857 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 IGSF9BQ9UPX0 1349 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 CHRNA5P30532 468 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 GOLGA7BQ2TAP0 167 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 TIMMDC1Q9NPL8 285 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 CKBP12277 381 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.93■□□□□ 0.46
SMAD4-201ENST00000342988 GTF2IRD2BQ6EKJ0 949 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 GTF2IRD2Q86UP8 949 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 SMURF2Q9HAU4 748 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 USP17L5A8MUK1 530 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 TSPAN1O60635 241 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 FGFR2P21802 821 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 CPT1AP50416 773 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 SMTNL2Q2TAL5 461 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 CCDC24Q8N4L8 307 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 EFR3BQ9Y2G0 817 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 GPD2P43304 727 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 SLC1A6P48664 564 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 GALNTL5Q7Z4T8 443 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 OR2L3Q8NG85 312 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 CRISPLD1Q9H336 500 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 CROTQ9UKG9 612 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.93■□□□□ 0.46
SMAD4-201ENST00000342988 SSU72P8A0A1W2PR75 194 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 TTC26A0AVF1 554 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 RHEBQ15382 184 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 GPAMQ9HCL2 828 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 TOR4AQ9NXH8 423 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms