RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 TMEM150BA6NC51 233 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 TMEM114B3SHH9 223 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 TPP1O14773 563 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 RSL1D1O76021 490 aaKnown RBP7.98□□□□□ -1.13
CD46-201ENST00000322875 ATP2B4P23634 1241 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 TBXAS1P24557 533 aaPredicted RBP7.98□□□□□ -1.13
CD46-201ENST00000322875 RPL10P27635 214 aaKnown RBP7.98□□□□□ -1.13
CD46-201ENST00000322875 ADORA2AP29274 412 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 QARSP47897 775 aaKnown RBP7.98□□□□□ -1.13
CD46-201ENST00000322875 NSUN2Q08J23 767 aaKnown RBP eCLIP7.98□□□□□ -1.13
CD46-201ENST00000322875 CAMK2BQ13554 666 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 TAF5Q15542 800 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 UGCGQ16739 394 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 MAP7D1Q3KQU3 841 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 LSM12Q3MHD2 195 aaKnown RBP7.98□□□□□ -1.13
CD46-201ENST00000322875 CDC42EP5Q6NZY7 148 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 DCUN1D2Q6PH85 259 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 NPNTQ6UXI9 565 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 MIER3Q7Z3K6 550 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 COLGALT2Q8IYK4 626 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 RNF169Q8NCN4 708 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 JOSD2Q8TAC2 188 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 LRTOMTQ8WZ04 291 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 RCN3Q96D15 328 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 CTRCQ99895 268 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 WDR41Q9HAD4 459 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 RAB6BQ9NRW1 208 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 TMEM216Q9P0N5 145 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 SARDHQ9UL12 918 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 AP4S1Q9Y587 144 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 TCAF2A6NFQ2 919 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 G3V2L1 256 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 STX16-NPEPL1H3BU86 382 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 TRIM24O15164 1050 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 EXTL3O43909 919 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 HSPA1AP0DMV8 641 aaKnown RBP7.98□□□□□ -1.13
CD46-201ENST00000322875 HSPA1BP0DMV9 641 aaKnown RBP7.98□□□□□ -1.13
CD46-201ENST00000322875 BMP2P12643 396 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 NFKBIAP25963 317 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 TCF7P36402 384 aaPredicted RBP7.98□□□□□ -1.13
CD46-201ENST00000322875 SERPINB5P36952 375 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 UBXN2AP68543 259 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 RAB39AQ14964 217 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 RGS21Q2M5E4 152 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 EGFLAMQ63HQ2 1017 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 SCARA3Q6AZY7 606 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 NIPA1Q7RTP0 329 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 CERS5Q8N5B7 392 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 ATP2A3Q93084 1043 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 THAP11Q96EK4 314 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 CAMKK2Q96RR4 588 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 FAM213AQ9BRX8 229 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 TCF7L2Q9NQB0 619 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 DNMT3BQ9UBC3 853 aaKnown RBP7.98□□□□□ -1.13
CD46-201ENST00000322875 BCLAF3A2AJT9 711 aaKnown RBP7.98□□□□□ -1.13
CD46-201ENST00000322875 TRIM38O00635 465 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 EIF2S1P05198 315 aaKnown RBP7.98□□□□□ -1.13
CD46-201ENST00000322875 EIF2B2P49770 351 aaKnown RBP7.98□□□□□ -1.13
CD46-201ENST00000322875 ESRRGP62508 458 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 TNK2Q07912 1038 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 BNIP3Q12983 259 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 TBC1D10BQ4KMP7 808 aaPredicted RBP7.98□□□□□ -1.13
CD46-201ENST00000322875 MTX3Q5HYI7 312 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 LMBRD2Q68DH5 695 aaPredicted RBP7.98□□□□□ -1.13
CD46-201ENST00000322875 SMYD5Q6GMV2 418 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 FAM47BQ8NA70 645 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 SLC4A11Q8NBS3 891 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 TUBA1CQ9BQE3 449 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 CCDC68Q9H2F9 335 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 RNPEPQ9H4A4 650 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 RSAD1Q9HA92 442 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 ZBTB26Q9HCK0 441 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 XPNPEP3Q9NQH7 507 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 PCDHGA7Q9Y5G6 932 aa7.98□□□□□ -1.13
CD46-201ENST00000322875 KAT6AQ92794 2004 aa7.97□□□□□ -1.13
CD46-201ENST00000322875 TPD52L2O43399 206 aaKnown RBP7.97□□□□□ -1.13
CD46-201ENST00000322875 CPNE6O95741 557 aa7.97□□□□□ -1.13
CD46-201ENST00000322875 TRUB2O95900 331 aaKnown RBP7.97□□□□□ -1.13
CD46-201ENST00000322875 CFBP00751 764 aa7.97□□□□□ -1.13
CD46-201ENST00000322875 HLA-DOAP06340 250 aa7.97□□□□□ -1.13
CD46-201ENST00000322875 TPSB2P20231 275 aa7.97□□□□□ -1.13
CD46-201ENST00000322875 PSMA2P25787 234 aa7.97□□□□□ -1.13
CD46-201ENST00000322875 SLC7A1P30825 629 aa7.97□□□□□ -1.13
CD46-201ENST00000322875 MLLT10P55197 1068 aa7.97□□□□□ -1.13
CD46-201ENST00000322875 NFIAQ12857 509 aa7.97□□□□□ -1.13
CD46-201ENST00000322875 TRAP1Q12931 704 aaKnown RBP7.97□□□□□ -1.13
CD46-201ENST00000322875 NFATC3Q12968 1075 aa7.97□□□□□ -1.13
CD46-201ENST00000322875 TRIM25Q14258 630 aaKnown RBP7.97□□□□□ -1.13
CD46-201ENST00000322875 TPSAB1Q15661 275 aa7.97□□□□□ -1.13
CD46-201ENST00000322875 PPP6R3Q5H9R7 873 aaPredicted RBP7.97□□□□□ -1.13
CD46-201ENST00000322875 APOBEC3HQ6NTF7 200 aaKnown RBP7.97□□□□□ -1.13
CD46-201ENST00000322875 RFX6Q8HWS3 928 aa7.97□□□□□ -1.13
CD46-201ENST00000322875 PACRGLQ8N7B6 248 aa7.97□□□□□ -1.13
CD46-201ENST00000322875 CNTD1Q8N815 330 aa7.97□□□□□ -1.13
CD46-201ENST00000322875 TNIP2Q8NFZ5 429 aa7.97□□□□□ -1.13
CD46-201ENST00000322875 USP13Q92995 863 aaPredicted RBP7.97□□□□□ -1.13
CD46-201ENST00000322875 SH2D3AQ9BRG2 576 aa7.97□□□□□ -1.13
CD46-201ENST00000322875 HAPLN2Q9GZV7 340 aa7.97□□□□□ -1.13
CD46-201ENST00000322875 NAA50Q9GZZ1 169 aaKnown RBP7.97□□□□□ -1.13
CD46-201ENST00000322875 NANOGQ9H9S0 305 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms