RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 HS6ST1O60243 411 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 AKAP3O75969 853 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 CYP2C9P11712 490 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 CD97P48960 835 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 RPL14P50914 215 aaKnown RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 MXD4Q14582 209 aaPredicted RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 TMEM126BQ8IUX1 230 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 ALLCQ8N6M5 410 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 FAM47BQ8NA70 645 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 EGFL8Q99944 293 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 HSD3B7Q9H2F3 369 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 EHD1Q9H4M9 534 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 MARCH7Q9H992 704 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 PNPLA8Q9NP80 782 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 AVENQ9NQS1 362 aaPredicted RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 PCDHGB4Q9UN71 923 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 AP3M1Q9Y2T2 418 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 MRC1P22897 1456 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 VAPBO95292 243 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 NADKO95544 446 aaPredicted RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 RBP1P09455 135 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 CYP2D6P10635 497 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 SLC18A1P54219 525 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 DGCR6Q14129 220 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 SPANXN3Q5MJ09 141 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 DENND5BQ6ZUT9 1274 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 RNF139Q8WU17 664 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 SCFD2Q8WU76 684 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 TCF12Q99081 682 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 SYT15Q9BQS2 421 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 TRPV5Q9NQA5 729 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 KRT87PA6NCN2 255 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 ALDH1B1P30837 517 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 RRM2P31350 389 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 ZC2HC1CQ53FD0 456 aaPredicted RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 PLEKHO2Q8TD55 490 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 CABLES1Q8TDN4 633 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 BAP1Q92560 729 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 MED15Q96RN5 788 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 DUSP9Q99956 384 aaKnown RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 PRRG3Q9BZD7 231 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 ACSS3Q9H6R3 686 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 FETUBQ9UGM5 382 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 REXO2Q9Y3B8 237 aaKnown RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 PCDHA11Q9Y5I1 949 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 COL15A1P39059 1388 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 TPP1O14773 563 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 TPPPO94811 219 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 IL18RAPO95256 599 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 AVPR1AP37288 418 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 PKNOX1P55347 436 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 RBM20Q5T481 1227 aaKnown RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 FAM160B2Q86V87 743 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 HM13Q8TCT9 377 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 RNF145Q96MT1 663 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 SP110Q9HB58 689 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 CCDC167Q9P0B6 97 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 TBX20Q9UMR3 447 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 PKD1L3Q7Z443 1732 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 A6NHS1 94 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 SLC37A4O43826 429 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 ARIH2O95376 493 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 PABPC1P11940 636 aaKnown RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 TGFBR2P37173 567 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 CCR3P51677 355 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 NME3Q13232 169 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF423Q2M1K9 1284 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 FAM45AQ8TCE6 357 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF669Q96BR6 464 aaPredicted RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 FAM167AQ96KS9 214 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 TRIM54Q9BYV2 358 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 RNF38Q9H0F5 515 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 JPH1Q9HDC5 661 aaPredicted RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 CD320Q9NPF0 282 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 RUVBL2Q9Y230 463 aaKnown RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 PLCE1Q9P212 2302 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 ATP9BO43861 1147 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 TCEA3O75764 348 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 PROSCO94903 275 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 GPD1P21695 349 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 GRK3P35626 688 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 CRKLP46109 303 aaKnown RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 SPIRE1Q08AE8 756 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 SCARF1Q14162 830 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 STILQ15468 1287 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 FGD2Q7Z6J4 655 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF420Q8TAQ5 688 aaPredicted RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 ITFG1Q8TB96 612 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 RMND5AQ9H871 391 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 CCNB1IP1Q9NPC3 277 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 ANAPC2Q9UJX6 822 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 PLLPQ9Y342 182 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 ASTN2O75129 1339 aaPredicted RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 LINC00854A0A1B0GVQ3 168 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 SH3PXD2BA1X283 911 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 E7ENX8 843 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 UPP2O95045 317 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 KCNA6P17658 529 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 WARSP23381 471 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms