RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PAIP2BQ9ULR5 123 aaKnown RBP13.42□□□□□ -0.26
CPNE1-201ENST00000317677 FARP1Q9Y4F1 1045 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-201ENST00000317677 MYO16Q9Y6X6 1858 aa13.42□□□□□ -0.26
CPNE1-201ENST00000317677 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-201ENST00000317677 ZNF487B1APH4 448 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 PQBP1O60828 265 aaKnown RBP13.41□□□□□ -0.26
CPNE1-201ENST00000317677 FBXO21O94952 628 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 LYNP07948 512 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 PIM1P11309 404 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-201ENST00000317677 PAX3P23760 479 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 OR1G1P47890 313 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 BCAR1P56945 870 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 CBX3Q13185 183 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 BFSP2Q13515 415 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 LRRC26Q2I0M4 334 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 TMEM259Q4ZIN3 620 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 ANKRD22Q5VYY1 191 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 CGB2Q6NT52 195 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 ZC3H18Q86VM9 953 aaKnown RBP13.41□□□□□ -0.26
CPNE1-201ENST00000317677 FAM71DQ8N9W8 422 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 PPFIBP2Q8ND30 876 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 ADAM32Q8TC27 787 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 C17orf50Q8WW18 174 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 CATSPER2Q96P56 530 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 CSPG4P5Q96PW8 444 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 POPDC2Q9HBU9 364 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 WDR6Q9NNW5 1121 aaKnown RBP13.41□□□□□ -0.26
CPNE1-201ENST00000317677 NINJ2Q9NZG7 142 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 MICAL3Q7RTP6 2002 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 SYNJ2BP-COX16A0A087WUM0 186 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 TCRBV7S3A2A0A539 114 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 M0QYT0 321 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 PITPNM1O00562 1244 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 APOL1O14791 398 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 MCF2LO15068 1137 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 ITGA2BP08514 1039 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 T-ENOLP0DO92 83 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 ZFXP17010 805 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-201ENST00000317677 PGFP49763 221 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 ATN1P54259 1190 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-201ENST00000317677 GBE1Q04446 702 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 ITGA9Q13797 1035 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 KLC3Q6P597 504 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 C4orf50Q6ZRC1 276 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 MAP7D3Q8IWC1 876 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 ZCCHC9Q8N567 271 aaKnown RBP13.41□□□□□ -0.26
CPNE1-201ENST00000317677 BBOF1Q8ND07 529 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 TTC8Q8TAM2 541 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 URGCPQ8TCY9 931 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 CPT1BQ92523 772 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 SERPINB12Q96P63 405 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 MAK16Q9BXY0 300 aaKnown RBP13.41□□□□□ -0.26
CPNE1-201ENST00000317677 MYLK2Q9H1R3 596 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 ELAC1Q9H777 363 aaKnown RBP13.41□□□□□ -0.26
CPNE1-201ENST00000317677 MARCH5Q9NX47 278 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 COX16Q9P0S2 106 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 ZNF212Q9UDV6 495 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 STARD13Q9Y3M8 1113 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 USH1CQ9Y6N9 552 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 COL4A6Q14031 1691 aa13.41□□□□□ -0.26
CPNE1-201ENST00000317677 A0A1W2PPC1 479 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 ENTPD5O75356 428 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 DCTN3O75935 186 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 ZBED1O96006 694 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 LTFP02788 710 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 GOT1P17174 413 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 TGM2P21980 687 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 AMPD1P23109 780 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 PTPN4P29074 926 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 YWHAHQ04917 246 aaPredicted RBP13.4□□□□□ -0.26
CPNE1-201ENST00000317677 CCDC6Q16204 474 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 KYNUQ16719 465 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 NCBP2-AS2Q69YL0 99 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 PM20D1Q6GTS8 502 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 VSTM1Q6UX27 236 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 LRRC74BQ6ZQY2 392 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 TRMT10CQ7L0Y3 403 aaKnown RBP13.4□□□□□ -0.26
CPNE1-201ENST00000317677 TAB3Q8N5C8 712 aaPredicted RBP13.4□□□□□ -0.26
CPNE1-201ENST00000317677 SCAMP5Q8TAC9 235 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 EPS8L3Q8TE67 593 aaKnown RBP13.4□□□□□ -0.26
CPNE1-201ENST00000317677 VWCEQ96DN2 955 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 LRRC37BQ96QE4 947 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 SAR1AQ9NR31 198 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 STX18Q9P2W9 335 aaKnown RBP13.4□□□□□ -0.26
CPNE1-201ENST00000317677 PRKAG2Q9UGJ0 569 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 SH3GLB1Q9Y371 365 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 HEY1Q9Y5J3 304 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 PLXNA3P51805 1871 aa13.4□□□□□ -0.26
CPNE1-201ENST00000317677 TMEM120BA0PK00 339 aa13.4□□□□□ -0.27
CPNE1-201ENST00000317677 TNFRSF10BO14763 440 aa13.4□□□□□ -0.27
CPNE1-201ENST00000317677 TMEM63AO94886 807 aa13.4□□□□□ -0.27
CPNE1-201ENST00000317677 OAZ2O95190 189 aa13.4□□□□□ -0.27
CPNE1-201ENST00000317677 ACSL3O95573 720 aa13.4□□□□□ -0.27
CPNE1-201ENST00000317677 PSMD7P51665 324 aa13.4□□□□□ -0.27
CPNE1-201ENST00000317677 ROR1Q01973 937 aa13.4□□□□□ -0.27
CPNE1-201ENST00000317677 NME3Q13232 169 aa13.4□□□□□ -0.27
CPNE1-201ENST00000317677 FASTKD3Q14CZ7 662 aaKnown RBP13.4□□□□□ -0.27
CPNE1-201ENST00000317677 KHDC1Q4VXA5 237 aaKnown RBP13.4□□□□□ -0.27
CPNE1-201ENST00000317677 SLC39A5Q6ZMH5 540 aa13.4□□□□□ -0.27
CPNE1-201ENST00000317677 ZNF554Q86TJ5 538 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms