RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 SIM1P81133 766 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 SLC6A3Q01959 620 aa17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 APBA1Q02410 837 aa17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 TAF5Q15542 800 aa17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 ZNF423Q2M1K9 1284 aa17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 FSCBQ5H9T9 825 aa17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 ACBD5Q5T8D3 534 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 OR6B2Q6IFH4 312 aa17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 OLFML1Q6UWY5 402 aa17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 SLC47A2Q86VL8 602 aa17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 PASD1Q8IV76 773 aa17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 TMEM35BQ8NCS4 154 aa17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 C1orf216Q8TAB5 229 aa17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 SNX19Q92543 992 aa17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 MYEOVQ96EZ4 313 aa17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 PRMT1Q99873 361 aaKnown RBP17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 PABPC3Q9H361 631 aaKnown RBP17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 C6orf106Q9H6K1 298 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 PAXBP1Q9Y5B6 917 aa17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 PCDHB9Q9Y5E1 797 aa17.21■□□□□ 0.35
TRAPPC1-201ENST00000303731 SIN3BO75182 1162 aa17.2■□□□□ 0.34
TRAPPC1-201ENST00000303731 SCNN1AP37088 669 aa17.2■□□□□ 0.34
TRAPPC1-201ENST00000303731 GRIA4P48058 902 aa17.2■□□□□ 0.34
TRAPPC1-201ENST00000303731 VASPP50552 380 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC1-201ENST00000303731 PLK1P53350 603 aa17.2■□□□□ 0.34
TRAPPC1-201ENST00000303731 MIIPQ5JXC2 388 aa17.2■□□□□ 0.34
TRAPPC1-201ENST00000303731 LRSAM1Q6UWE0 723 aa17.2■□□□□ 0.34
TRAPPC1-201ENST00000303731 CLEC17AQ6ZS10 378 aa17.2■□□□□ 0.34
TRAPPC1-201ENST00000303731 FAM183BPQ6ZVS7 135 aa17.2■□□□□ 0.34
TRAPPC1-201ENST00000303731 CCAR2Q8N163 923 aaKnown RBP17.2■□□□□ 0.34
TRAPPC1-201ENST00000303731 MSANTD4Q8NCY6 345 aa17.2■□□□□ 0.34
TRAPPC1-201ENST00000303731 ADAM33Q9BZ11 813 aa17.2■□□□□ 0.34
TRAPPC1-201ENST00000303731 PDCL3Q9H2J4 239 aa17.2■□□□□ 0.34
TRAPPC1-201ENST00000303731 FZD4Q9ULV1 537 aa17.2■□□□□ 0.34
TRAPPC1-201ENST00000303731 STAP1Q9ULZ2 295 aa17.2■□□□□ 0.34
TRAPPC1-201ENST00000303731 KNL1Q8NG31 2342 aa17.2■□□□□ 0.34
TRAPPC1-201ENST00000303731 NYNRINQ9P2P1 1898 aaKnown RBP17.2■□□□□ 0.34
TRAPPC1-201ENST00000303731 TMEM8BA6NDV4 472 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 ADH1BP00325 375 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 PROS1P07225 676 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 CD27P26842 260 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 CDH5P33151 784 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 PITX1P78337 314 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 RAPGEF1Q13905 1077 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 KCNJ12Q14500 433 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 CST6Q15828 149 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 PTPN20Q4JDL3 420 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 C9orf64Q5T6V5 341 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 UNQ6494/PRO21346Q6UXR6 183 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 MMS22LQ6ZRQ5 1243 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 SND1Q7KZF4 910 aaKnown RBP eCLIP17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 NAXDQ8IW45 347 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 DHX40Q8IX18 779 aaKnown RBP17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 OR2I1PQ8NGU4 316 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 GANCQ8TET4 914 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 BIRC7Q96CA5 298 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 RPRD1AQ96P16 312 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 SCNM1Q9BWG6 230 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 GAREM1Q9H706 876 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 FBXL12Q9NXK8 326 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 ADAMTS1Q9UHI8 967 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 NEUROG3Q9Y4Z2 214 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 PCDHGB2Q9Y5G2 931 aa17.19■□□□□ 0.34
TRAPPC1-201ENST00000303731 SYNJ2BP-COX16A0A087WUM0 186 aa17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 SPAARA0A1B0GVQ0 90 aa17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 LRRC72A6NJI9 287 aa17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 PES1O00541 588 aaKnown RBP17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 CLDN11O75508 207 aa17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 GRAP2O75791 330 aa17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 LSM8O95777 96 aaKnown RBP17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 F9P00740 461 aa17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 ERBB2P04626 1255 aa17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 ANP32AP39687 249 aaKnown RBP17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 NME3Q13232 169 aa17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 AUHQ13825 339 aaKnown RBP17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 ELAVL3Q14576 367 aaKnown RBP17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 DRAP1Q14919 205 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 SUZ12Q15022 739 aaKnown RBP17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 TRIP6Q15654 476 aaKnown RBP17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 TCP11X2Q5H9J9 407 aa17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 BRMS1LQ5PSV4 323 aa17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 KLHDC7AQ5VTJ3 777 aa17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 FBXL22Q6P050 247 aa17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 SKA1Q96BD8 255 aa17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 PGAP3Q96FM1 320 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 OMDQ99983 421 aa17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 COX16Q9P0S2 106 aa17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 AJAP1Q9UKB5 411 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 DAAM1Q9Y4D1 1078 aa17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 CABIN1Q9Y6J0 2220 aa17.18■□□□□ 0.34
TRAPPC1-201ENST00000303731 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC1-201ENST00000303731 TTC34A8MYJ7 566 aa17.17■□□□□ 0.34
TRAPPC1-201ENST00000303731 M0QYT0 321 aa17.17■□□□□ 0.34
TRAPPC1-201ENST00000303731 SH3BP5O60239 455 aa17.17■□□□□ 0.34
TRAPPC1-201ENST00000303731 FSBPO95073 299 aa17.17■□□□□ 0.34
TRAPPC1-201ENST00000303731 TPM2P07951 284 aa17.17■□□□□ 0.34
TRAPPC1-201ENST00000303731 UCHL3P15374 230 aa17.17■□□□□ 0.34
TRAPPC1-201ENST00000303731 CYP11B1P15538 503 aa17.17■□□□□ 0.34
TRAPPC1-201ENST00000303731 PDGFRAP16234 1089 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms