RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 OTUD5Q96G74 571 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 EPAS1Q99814 870 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 FAM49AQ9H0Q0 323 aaPredicted RBP13.88□□□□□ -0.19
CTTN-201ENST00000301843 PRDM12Q9H4Q4 367 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 DDX43Q9NXZ2 648 aaKnown RBP13.88□□□□□ -0.19
CTTN-201ENST00000301843 LTBP3Q9NS15 1303 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 ZNF195O14628 629 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 BIRC5O15392 142 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 RTN3O95197 1032 aaPredicted RBP13.88□□□□□ -0.19
CTTN-201ENST00000301843 IL18RAPO95256 599 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 P4HA1P13674 534 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 EDNRBP24530 442 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 ACAT1P24752 427 aaKnown RBP13.88□□□□□ -0.19
CTTN-201ENST00000301843 FOLH1Q04609 750 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 LAMB3Q13751 1172 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 CELF3Q5SZQ8 465 aaKnown RBP13.88□□□□□ -0.19
CTTN-201ENST00000301843 CERCAMQ5T4B2 595 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 KDELC2Q7Z4H8 507 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 CATSPER2Q96P56 530 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 TRAPPC9Q96Q05 1148 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 GORASP1Q9BQQ3 440 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 COPS7BQ9H9Q2 264 aaPredicted RBP13.88□□□□□ -0.19
CTTN-201ENST00000301843 DDX18Q9NVP1 670 aaKnown RBP13.88□□□□□ -0.19
CTTN-201ENST00000301843 SSX2IPQ9Y2D8 614 aa13.88□□□□□ -0.19
CTTN-201ENST00000301843 IGKV6-21A0A0C4DH24 114 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 TMEM233B4DJY2 109 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 SOCS7O14512 581 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 PEX1O43933 1283 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 GCATO75600 419 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 TRPA1O75762 1119 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 NIPAL4Q0D2K0 466 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 TLR1Q15399 786 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.87□□□□□ -0.19
CTTN-201ENST00000301843 KYAT3Q6YP21 454 aaKnown RBP13.87□□□□□ -0.19
CTTN-201ENST00000301843 RPS27LQ71UM5 84 aaKnown RBP13.87□□□□□ -0.19
CTTN-201ENST00000301843 MARK2Q7KZI7 788 aaKnown RBP13.87□□□□□ -0.19
CTTN-201ENST00000301843 ST13P4Q8IZP2 240 aaPredicted RBP13.87□□□□□ -0.19
CTTN-201ENST00000301843 MCUQ8NE86 351 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 NR1H4Q96RI1 486 aaPredicted RBP13.87□□□□□ -0.19
CTTN-201ENST00000301843 ZNF670Q9BS34 389 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 FAM72CH0Y354 149 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 SERPINB9P50453 376 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 RBP5P82980 135 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 KLF10Q13118 480 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 FAM72AQ5TYM5 149 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 FAM72DQ6L9T8 149 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 ARCQ7LC44 396 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 SDCCAG8Q86SQ7 713 aaPredicted RBP13.87□□□□□ -0.19
CTTN-201ENST00000301843 FAM72BQ86X60 149 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 DEFB106AQ8N104 65 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 ZNF567Q8N184 647 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.87□□□□□ -0.193e-6■■□□□ 11.7
CTTN-201ENST00000301843 SLC35F5Q8WV83 523 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 CDKL2Q92772 493 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 FAM167AQ96KS9 214 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 QKIQ96PU8 341 aaKnown RBP eCLIP13.87□□□□□ -0.19
CTTN-201ENST00000301843 CDRT15Q96T59 188 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 NDNQ99608 321 aa13.87□□□□□ -0.19
CTTN-201ENST00000301843 SF3B1O75533 1304 aaKnown RBP eCLIP13.86□□□□□ -0.192e-6■■■■■ 114.1
CTTN-201ENST00000301843 A0A0A0MRY4 1105 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 H3BNX3 289 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 FKBP6O75344 327 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 UQCRBP14927 111 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 XRCC1P18887 633 aaPredicted RBP13.86□□□□□ -0.19
CTTN-201ENST00000301843 RPS6KA3P51812 740 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 THOP1P52888 689 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 PDCD2Q16342 344 aaPredicted RBP13.86□□□□□ -0.19
CTTN-201ENST00000301843 FSTL4Q6MZW2 842 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 RIOX2Q8IUF8 465 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 SLC2A14Q8TDB8 520 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 SPATA13Q96N96 652 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 OMDQ99983 421 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 UBAP1Q9NZ09 502 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 KLHL2O95198 593 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 C22orf31O95567 290 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 MT-CO1P00395 513 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 PMLP29590 882 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 SULT1E1P49888 294 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 SEMA5AQ13591 1074 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 GSTA3Q16772 222 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 TDRD5Q8NAT2 981 aaKnown RBP13.86□□□□□ -0.19
CTTN-201ENST00000301843 USP33Q8TEY7 942 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 EIF2AQ9BY44 585 aaKnown RBP13.86□□□□□ -0.19
CTTN-201ENST00000301843 GRIP2Q9C0E4 1043 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 KLHL8Q9P2G9 620 aaPredicted RBP13.86□□□□□ -0.19
CTTN-201ENST00000301843 SLC39A10Q9ULF5 831 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 A0A096LPK6 155 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 C15orf38-AP3S2A0A0A6YYH1 394 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 PYGLP06737 847 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 FGFR3P22607 806 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 C6orf52Q5T4I8 152 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 ACAD11Q709F0 780 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 ARPINQ7Z6K5 226 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 TMA16Q96EY4 203 aaKnown RBP13.86□□□□□ -0.19
CTTN-201ENST00000301843 CERS2Q96G23 380 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 ELP3Q9H9T3 547 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 CHRAC1Q9NRG0 131 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 DTNAQ9Y4J8 743 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 PPP2R3BQ9Y5P8 575 aa13.86□□□□□ -0.19
CTTN-201ENST00000301843 IRF6O14896 467 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms