RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 COX16Q9P0S2 106 aa14.33□□□□□ -0.11
TMEM41B-201ENST00000299596 EPG5Q9HCE0 2579 aa14.33□□□□□ -0.12
TMEM41B-201ENST00000299596 CKAP5Q14008 2032 aa14.33□□□□□ -0.12
TMEM41B-201ENST00000299596 CEP192Q8TEP8 1941 aa14.33□□□□□ -0.12
TMEM41B-201ENST00000299596 PI4KAP42356 2102 aa14.33□□□□□ -0.12
TMEM41B-201ENST00000299596 CHD8Q9HCK8 2581 aa14.33□□□□□ -0.12
TMEM41B-201ENST00000299596 EDDM13A0A1B0GTR0 161 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 A0A1B0GVM2 712 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 TCAF2A6NFQ2 919 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 SIN3BO75182 1162 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 ERBB2P04626 1255 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 RDXP35241 583 aaKnown RBP14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 SULT2A1Q06520 285 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 ST3GAL2Q16842 350 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 PTPN20Q4JDL3 420 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 TCP11X2Q5H9J9 407 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 C9orf64Q5T6V5 341 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 APCDD1Q8J025 514 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 C1orf216Q8TAB5 229 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 GANCQ8TET4 914 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 PABPC3Q9H361 631 aaKnown RBP14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 MTG2Q9H4K7 406 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 OSGEPQ9NPF4 335 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 SAMSN1Q9NSI8 373 aaKnown RBP14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 WASF3Q9UPY6 502 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 ITIH6Q6UXX5 1313 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 TTC34A8MYJ7 566 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 M0QYT0 321 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 DAB1O75553 588 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 CER1O95813 267 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 PNMA6AP0CW24 399 aaPredicted RBP14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 UCHL3P15374 230 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 CYP11B1P15538 503 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 CDH5P33151 784 aaPredicted RBP14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 MATKP42679 507 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 CTSOP43234 321 aaPredicted RBP14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 AFF3P51826 1226 aaKnown RBP14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 PLK1P53350 603 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 SIM1P81133 766 aaPredicted RBP14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 NME3Q13232 169 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 AUHQ13825 339 aaKnown RBP14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 FBXL22Q6P050 247 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 DHX40Q8IX18 779 aaKnown RBP14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 SNX19Q92543 992 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 C18orf8Q96DM3 657 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 RPRD1AQ96P16 312 aaPredicted RBP14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 NAA15Q9BXJ9 866 aaKnown RBP14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 STK33Q9BYT3 514 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 PLCB1Q9NQ66 1216 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 LMBRD1Q9NUN5 540 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 FBXL12Q9NXK8 326 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 SLCO3A1Q9UIG8 710 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 FHOD1Q9Y613 1164 aa14.32□□□□□ -0.12
TMEM41B-201ENST00000299596 PCDH15Q96QU1 1955 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 ASCC3Q8N3C0 2202 aaKnown RBP14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 SPAARA0A1B0GVQ0 90 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 FSBPO95073 299 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 TRIM16O95361 564 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 F9P00740 461 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 ZNF883P0CG24 379 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 PDGFRAP16234 1089 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 CD27P26842 260 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 SCNN1AP37088 669 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 GABRB2P47870 512 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 TEAD4Q15561 434 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 CST6Q15828 149 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 LRSAM1Q6UWE0 723 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 SND1Q7KZF4 910 aaKnown RBP eCLIP14.31□□□□□ -0.124e-7■■■■□ 19.7
TMEM41B-201ENST00000299596 ENOX1Q8TC92 643 aaKnown RBP14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 BIRC7Q96CA5 298 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 RPL10LQ96L21 214 aaKnown RBP14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 NPY6RQ99463 290 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 WDCPQ9H6R7 721 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 GAREM1Q9H706 876 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 STAP1Q9ULZ2 295 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 PAXBP1Q9Y5B6 917 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 PCDHB9Q9Y5E1 797 aa14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 MUC22E2RYF6 1773 aaPredicted RBP14.31□□□□□ -0.12
TMEM41B-201ENST00000299596 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.3□□□□□ -0.12
TMEM41B-201ENST00000299596 SH3BP5O60239 455 aa14.3□□□□□ -0.12
TMEM41B-201ENST00000299596 PAGE1O75459 146 aa14.3□□□□□ -0.12
TMEM41B-201ENST00000299596 CLDN11O75508 207 aa14.3□□□□□ -0.12
TMEM41B-201ENST00000299596 LSM8O95777 96 aaKnown RBP14.3□□□□□ -0.12
TMEM41B-201ENST00000299596 TPM2P07951 284 aa14.3□□□□□ -0.12
TMEM41B-201ENST00000299596 MZF1P28698 734 aaPredicted RBP14.3□□□□□ -0.12
TMEM41B-201ENST00000299596 SLC8A1P32418 973 aa14.3□□□□□ -0.12
TMEM41B-201ENST00000299596 CSNK1EP49674 416 aaKnown RBP14.3□□□□□ -0.12
TMEM41B-201ENST00000299596 CXCR3P49682 368 aa14.3□□□□□ -0.12
TMEM41B-201ENST00000299596 VASPP50552 380 aaPredicted RBP14.3□□□□□ -0.12
TMEM41B-201ENST00000299596 RNASE9P60153 205 aaKnown RBP14.3□□□□□ -0.12
TMEM41B-201ENST00000299596 ZNF177Q13360 481 aaPredicted RBP14.3□□□□□ -0.12
TMEM41B-201ENST00000299596 ELAVL3Q14576 367 aaKnown RBP14.3□□□□□ -0.12
TMEM41B-201ENST00000299596 TRIP6Q15654 476 aaKnown RBP14.3□□□□□ -0.12
TMEM41B-201ENST00000299596 HLA-BQ31612 363 aa14.3□□□□□ -0.12
TMEM41B-201ENST00000299596 BRMS1LQ5PSV4 323 aa14.3□□□□□ -0.12
TMEM41B-201ENST00000299596 ACBD5Q5T8D3 534 aaPredicted RBP14.3□□□□□ -0.12
TMEM41B-201ENST00000299596 CXorf57Q6NSI4 855 aaKnown RBP14.3□□□□□ -0.12
TMEM41B-201ENST00000299596 ERICH1Q86X53 443 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms