RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 EPB41L1Q9H4G0 881 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 SELENONQ9NZV5 590 aa11.67□□□□□ -0.54
TRUB1-201ENST00000298746 ZNF70Q9UC06 446 aaPredicted RBP11.67□□□□□ -0.54
TRUB1-201ENST00000298746 OATP04181 439 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 CXCL8P10145 99 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 ZNF132P52740 706 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 FSTL1Q12841 308 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 TUBB3Q13509 450 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 PDK2Q15119 407 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 GLRA4Q5JXX5 417 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 DUS1LQ6P1R4 473 aaKnown RBP11.66□□□□□ -0.54
TRUB1-201ENST00000298746 FAM183BPQ6ZVS7 135 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 FASTKD5Q7L8L6 764 aaKnown RBP11.66□□□□□ -0.54
TRUB1-201ENST00000298746 SNX31Q8N9S9 440 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 RNF169Q8NCN4 708 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 DDHD1Q8NEL9 900 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 ACMSDQ8TDX5 336 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 PIWIL1Q96J94 861 aaKnown RBP11.66□□□□□ -0.54
TRUB1-201ENST00000298746 SORT1Q99523 831 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 PORCNQ9H237 461 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 NOL11Q9H8H0 719 aaKnown RBP11.66□□□□□ -0.54
TRUB1-201ENST00000298746 PCDH18Q9HCL0 1135 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 EMCNQ9ULC0 261 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 PCDHGC3Q9UN70 934 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 ZNF510Q9Y2H8 683 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 ZNFX1Q9P2E3 1918 aaKnown RBP11.66□□□□□ -0.54
TRUB1-201ENST00000298746 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.66□□□□□ -0.54
TRUB1-201ENST00000298746 MMP10P09238 476 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 CD1EP15812 388 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 CKMT2P17540 419 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 TGM2P21980 687 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 FUT4P22083 530 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 RPL10P27635 214 aaKnown RBP11.66□□□□□ -0.54
TRUB1-201ENST00000298746 PGGT1BP53609 377 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 MPP3Q13368 585 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 CEACAM7Q14002 265 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 DGKDQ16760 1214 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 PLD6Q8N2A8 252 aaKnown RBP11.66□□□□□ -0.54
TRUB1-201ENST00000298746 RDM1Q8NG50 284 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 FAM151AQ8WW52 585 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 TMEM176AQ96HP8 235 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 TWNKQ96RR1 684 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 RPAP3Q9H6T3 665 aaPredicted RBP11.66□□□□□ -0.54
TRUB1-201ENST00000298746 NMRAL1Q9HBL8 299 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 TCRBV5S1A1TA0A578 114 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 PHGDHO43175 533 aaKnown RBP11.66□□□□□ -0.54
TRUB1-201ENST00000298746 VAPBO95292 243 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 OCM2P0CE71 109 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 OCMP0CE72 109 aaPredicted RBP11.66□□□□□ -0.54
TRUB1-201ENST00000298746 TMED10P49755 219 aaKnown RBP11.66□□□□□ -0.54
TRUB1-201ENST00000298746 CDK18Q07002 472 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 SURF1Q15526 300 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 RNF135Q8IUD6 432 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 ERI1Q8IV48 349 aaKnown RBP11.66□□□□□ -0.54
TRUB1-201ENST00000298746 LILRA2Q8N149 483 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 FNDC8Q8TC99 324 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 CDHR1Q96JP9 859 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 GATA5Q9BWX5 397 aaPredicted RBP11.66□□□□□ -0.54
TRUB1-201ENST00000298746 SLC38A10Q9HBR0 1119 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 BFARQ9NZS9 450 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 CCDC167Q9P0B6 97 aa11.66□□□□□ -0.54
TRUB1-201ENST00000298746 TNRC6CQ9HCJ0 1690 aaKnown RBP11.65□□□□□ -0.54
TRUB1-201ENST00000298746 KCNK1O00180 336 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 HDAC3O15379 428 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 RNASEH2AO75792 299 aaKnown RBP11.65□□□□□ -0.54
TRUB1-201ENST00000298746 H6PDO95479 791 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 TCF7P36402 384 aaPredicted RBP11.65□□□□□ -0.54
TRUB1-201ENST00000298746 PTGER2P43116 358 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 POU5F1BQ06416 359 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 USP10Q14694 798 aaKnown RBP11.65□□□□□ -0.54
TRUB1-201ENST00000298746 CCDC153Q494R4 210 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 SETD3Q86TU7 594 aaPredicted RBP11.65□□□□□ -0.54
TRUB1-201ENST00000298746 VSIG10LQ86VR7 867 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 C12orf29Q8N999 325 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 ZBTB8BQ8NAP8 495 aaPredicted RBP11.65□□□□□ -0.54
TRUB1-201ENST00000298746 SLC4A11Q8NBS3 891 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 RP9Q8TA86 221 aaKnown RBP11.65□□□□□ -0.54
TRUB1-201ENST00000298746 GPRASP2Q96D09 838 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 ZNF696Q9H7X3 374 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 SYBUQ9NX95 663 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 TSPAN16Q9UKR8 245 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 GINS2Q9Y248 185 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 RIPK3Q9Y572 518 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 PCDHB12Q9Y5F1 795 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 FBXO21O94952 628 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 LTFP02788 710 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 SUPT20HL2P0C7V6 817 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 PPARGP37231 505 aaPredicted RBP11.65□□□□□ -0.54
TRUB1-201ENST00000298746 RPL14P50914 215 aaKnown RBP11.65□□□□□ -0.54
TRUB1-201ENST00000298746 ATXN1P54253 815 aaKnown RBP11.65□□□□□ -0.54
TRUB1-201ENST00000298746 IGBP1P78318 339 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 CLDN10P78369 228 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 IRF9Q00978 393 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 OLIG2Q13516 323 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 CAPSQ13938 189 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 SUPT20HL1Q3ZLR7 823 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 GPR107Q5VW38 600 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 CROCCP3Q8IVE0 287 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 SPATA6LQ8N4H0 392 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 PQLC3Q8N755 202 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms