RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 BLIDQ8IZY5 108 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 LRRC47Q8N1G4 583 aaKnown RBP11.97□□□□□ -0.49
SNIP1-201ENST00000296215 METTL22Q9BUU2 404 aaPredicted RBP11.97□□□□□ -0.49
SNIP1-201ENST00000296215 NUSAP1Q9BXS6 441 aaKnown RBP11.97□□□□□ -0.49
SNIP1-201ENST00000296215 GRID1Q9ULK0 1009 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 KDM5CP41229 1560 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 SAMD9Q5K651 1589 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 A0A1W2PQ67 120 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 PIK3R2O00459 728 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 TYK2P29597 1187 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 NMT1P30419 496 aaKnown RBP11.97□□□□□ -0.49
SNIP1-201ENST00000296215 CALCRLQ16602 461 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 HADHQ16836 314 aaKnown RBP11.97□□□□□ -0.49
SNIP1-201ENST00000296215 METTL4Q8N3J2 472 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 PAFAH2Q99487 392 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 TMEM121Q9BTD3 319 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 PTBP2Q9UKA9 531 aaKnown RBP11.97□□□□□ -0.49
SNIP1-201ENST00000296215 CDYLQ9Y232 598 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 UGT2A1Q9Y4X1 527 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 ARHGEF11O15085 1522 aa11.97□□□□□ -0.49
SNIP1-201ENST00000296215 BMP6P22004 513 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 FMO4P31512 558 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 FOXN2P32314 431 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 MLLT3P42568 568 aaPredicted RBP11.96□□□□□ -0.49
SNIP1-201ENST00000296215 MAPKAPK2P49137 400 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 POLA2Q14181 598 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 EMC2Q15006 297 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 EARS2Q5JPH6 523 aaKnown RBP11.96□□□□□ -0.49
SNIP1-201ENST00000296215 ZNF572Q7Z3I7 529 aaPredicted RBP11.96□□□□□ -0.49
SNIP1-201ENST00000296215 CLHC1Q8NHS4 586 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 TESCQ96BS2 214 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 THG1LQ9NWX6 298 aaKnown RBP11.96□□□□□ -0.49
SNIP1-201ENST00000296215 POMPQ9Y244 141 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 HEMK1Q9Y5R4 338 aaPredicted RBP11.96□□□□□ -0.49
SNIP1-201ENST00000296215 UGGT2Q9NYU1 1516 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 TTLL8A6PVC2 850 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 RNF225M0QZC1 329 aaPredicted RBP11.96□□□□□ -0.49
SNIP1-201ENST00000296215 TFAP2AP05549 437 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 PIK3R1P27986 724 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 GSTM2P28161 218 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 PIK3CBP42338 1070 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 CASP4P49662 377 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 CYP2J2P51589 502 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 SMARCB1Q12824 385 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 PTPAQ15257 358 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 TAF8Q7Z7C8 310 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 LNX2Q8N448 690 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 KBTBD8Q8NFY9 601 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 TP53INP1Q96A56 240 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 IL1RL2Q9HB29 575 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 CHORDC1Q9UHD1 332 aaPredicted RBP11.96□□□□□ -0.49
SNIP1-201ENST00000296215 HCN4Q9Y3Q4 1203 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 PCDH11YQ9BZA8 1340 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 MYOM2P54296 1465 aa11.96□□□□□ -0.49
SNIP1-201ENST00000296215 TP53P04637 393 aaPredicted RBP11.96□□□□□ -0.5
SNIP1-201ENST00000296215 GM2AP17900 193 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 SLC13A2Q13183 592 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 TXNRD1Q16881 649 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 LEMD2Q8NC56 503 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 TRPV3Q8NET8 790 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 GJA10Q969M2 543 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 AK8Q96MA6 479 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 C12orf57Q99622 126 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 ZNF416Q9BWM5 594 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 IPO11Q9UI26 975 aaKnown RBP11.96□□□□□ -0.5
SNIP1-201ENST00000296215 MAGED1Q9Y5V3 778 aaPredicted RBP11.96□□□□□ -0.5
SNIP1-201ENST00000296215 LRRC72A6NJI9 287 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 NDUFS2O75306 463 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 PBX1P40424 430 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 ESCO2Q56NI9 601 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 MTX3Q5HYI7 312 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 TIGD7Q6NT04 549 aaPredicted RBP11.96□□□□□ -0.5
SNIP1-201ENST00000296215 LMBR1LQ6UX01 489 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 PTAR1Q7Z6K3 402 aaPredicted RBP11.96□□□□□ -0.5
SNIP1-201ENST00000296215 ST8SIA2Q92186 375 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 RACGAP1Q9H0H5 632 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 ACAD9Q9H845 621 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 MAN1C1Q9NR34 630 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 VTI1BQ9UEU0 232 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 GMEB2Q9UKD1 530 aa11.96□□□□□ -0.5
SNIP1-201ENST00000296215 DFFAO00273 331 aa11.95□□□□□ -0.5
SNIP1-201ENST00000296215 CDK2AP1O14519 115 aa11.95□□□□□ -0.5
SNIP1-201ENST00000296215 TRAFD1O14545 582 aaPredicted RBP11.95□□□□□ -0.5
SNIP1-201ENST00000296215 TRIM13O60858 407 aa11.95□□□□□ -0.5
SNIP1-201ENST00000296215 LDLRP01130 860 aa11.95□□□□□ -0.5
SNIP1-201ENST00000296215 OGNP20774 298 aaKnown RBP11.95□□□□□ -0.5
SNIP1-201ENST00000296215 AKAP5P24588 427 aa11.95□□□□□ -0.5
SNIP1-201ENST00000296215 NUP62P37198 522 aaPredicted RBP11.95□□□□□ -0.5
SNIP1-201ENST00000296215 PLCL1Q15111 1095 aa11.95□□□□□ -0.5
SNIP1-201ENST00000296215 NT5DC1Q5TFE4 455 aa11.95□□□□□ -0.5
SNIP1-201ENST00000296215 VWA5B1Q5TIE3 1220 aa11.95□□□□□ -0.5
SNIP1-201ENST00000296215 TTC39BQ5VTQ0 682 aaPredicted RBP11.95□□□□□ -0.5
SNIP1-201ENST00000296215 FBXO31Q5XUX0 539 aaPredicted RBP11.95□□□□□ -0.5
SNIP1-201ENST00000296215 ARMC6Q6NXE6 501 aa11.95□□□□□ -0.5
SNIP1-201ENST00000296215 KRT25Q7Z3Z0 450 aa11.95□□□□□ -0.5
SNIP1-201ENST00000296215 GPR180Q86V85 440 aa11.95□□□□□ -0.5
SNIP1-201ENST00000296215 TPH2Q8IWU9 490 aa11.95□□□□□ -0.5
SNIP1-201ENST00000296215 SIMC1Q8NDZ2 872 aa11.95□□□□□ -0.5
SNIP1-201ENST00000296215 FAF2Q96CS3 445 aa11.95□□□□□ -0.5
SNIP1-201ENST00000296215 ELMO2Q96JJ3 720 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms