RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 CNTN3Q9P232 1028 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 DSEQ9UL01 958 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 INPP5FQ9Y2H2 1132 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 TRPC5OSA6NMA1 111 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 CXorf49A8MYA2 514 aaPredicted RBP10.28□□□□□ -0.76
HMGCR-201ENST00000287936 NEMP1O14524 444 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 IRX1P78414 480 aaPredicted RBP10.28□□□□□ -0.76
HMGCR-201ENST00000287936 MAP7Q14244 749 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 HSP90AA5PQ58FG0 334 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 TMEM63BQ5T3F8 832 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 NCBP2-AS2Q69YL0 99 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 CES3Q6UWW8 571 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 RINLQ6ZS11 566 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 CAND1Q86VP6 1230 aaKnown RBP10.28□□□□□ -0.76
HMGCR-201ENST00000287936 SLC9A7Q96T83 725 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 TRIM56Q9BRZ2 755 aaKnown RBP10.28□□□□□ -0.76
HMGCR-201ENST00000287936 IGSF9Q9P2J2 1179 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 STX18Q9P2W9 335 aaKnown RBP10.28□□□□□ -0.76
HMGCR-201ENST00000287936 CORO1CQ9ULV4 474 aaPredicted RBP10.28□□□□□ -0.76
HMGCR-201ENST00000287936 FIS1Q9Y3D6 152 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 YBX3P16989 372 aaKnown RBP eCLIP10.28□□□□□ -0.763e-7■■□□□ 12.8
HMGCR-201ENST00000287936 ADRA1BP35368 520 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 PRKAA1Q13131 559 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 SNX17Q15036 470 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 GPR162Q16538 588 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 LZTR1Q8N653 840 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 EMID1Q96A84 441 aaPredicted RBP10.28□□□□□ -0.76
HMGCR-201ENST00000287936 SIGLEC10Q96LC7 697 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 ZNF184Q99676 751 aaPredicted RBP10.28□□□□□ -0.76
HMGCR-201ENST00000287936 NMRAL1Q9HBL8 299 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 TCF7L2Q9NQB0 619 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 VTI1BQ9UEU0 232 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 ACOT9Q9Y305 439 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 PLIN3O60664 434 aa10.27□□□□□ -0.76
HMGCR-201ENST00000287936 KPNA6O60684 536 aa10.27□□□□□ -0.76
HMGCR-201ENST00000287936 MOCS2O96007 188 aaPredicted RBP10.27□□□□□ -0.76
HMGCR-201ENST00000287936 SMPD1P17405 629 aa10.27□□□□□ -0.76
HMGCR-201ENST00000287936 ARL1P40616 181 aaPredicted RBP10.27□□□□□ -0.76
HMGCR-201ENST00000287936 SLC12A1Q13621 1099 aa10.27□□□□□ -0.76
HMGCR-201ENST00000287936 ZNF792Q3KQV3 632 aa10.27□□□□□ -0.76
HMGCR-201ENST00000287936 SKA1Q96BD8 255 aa10.27□□□□□ -0.76
HMGCR-201ENST00000287936 FAR2Q96K12 515 aa10.27□□□□□ -0.76
HMGCR-201ENST00000287936 APOL2Q9BQE5 337 aa10.27□□□□□ -0.76
HMGCR-201ENST00000287936 TSPYL2Q9H2G4 693 aaPredicted RBP10.27□□□□□ -0.76
HMGCR-201ENST00000287936 SP110Q9HB58 689 aa10.27□□□□□ -0.76
HMGCR-201ENST00000287936 SNX15Q9NRS6 342 aa10.27□□□□□ -0.76
HMGCR-201ENST00000287936 CDH9Q9ULB4 789 aa10.27□□□□□ -0.76
HMGCR-201ENST00000287936 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.27□□□□□ -0.77
HMGCR-201ENST00000287936 AIM2O14862 343 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 TM7SF2O76062 418 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 FAM163BP0C2L3 166 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 DHRS4L1P0CG22 281 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 STMN1P16949 149 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 HK2P52789 917 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 AAGABQ6PD74 315 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 ULK2Q8IYT8 1036 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 ENDOVQ8N8Q3 282 aaKnown RBP10.27□□□□□ -0.77
HMGCR-201ENST00000287936 RDH11Q8TC12 318 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 PIWIL1Q96J94 861 aaKnown RBP10.27□□□□□ -0.77
HMGCR-201ENST00000287936 GPAMQ9HCL2 828 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 DNAJC28Q9NX36 388 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 TAS2R1Q9NYW7 299 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 GPR182O15218 404 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 C6orf222P0C671 652 aaPredicted RBP10.27□□□□□ -0.77
HMGCR-201ENST00000287936 GRIK1P39086 918 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 MAGEA6P43360 314 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 ERFP50548 548 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 TRIP10Q15642 601 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 IZUMO2Q6UXV1 221 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 RIPOR1Q6ZS17 1223 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 CYS1Q717R9 158 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 URGCPQ8TCY9 931 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 CLEC4CQ8WTT0 213 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 CCDC126Q96EE4 140 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 NACA2Q9H009 215 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 SLC24A3Q9HC58 644 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 RNF19AQ9NV58 838 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 GDAP2Q9NXN4 497 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 RUVBL2Q9Y230 463 aaKnown RBP10.27□□□□□ -0.77
HMGCR-201ENST00000287936 SSX2IPQ9Y2D8 614 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 IPPQ9Y573 584 aa10.27□□□□□ -0.77
HMGCR-201ENST00000287936 CCDC78A2IDD5 438 aa10.26□□□□□ -0.77
HMGCR-201ENST00000287936 PRR5-ARHGAP8B1AHC4 643 aa10.26□□□□□ -0.77
HMGCR-201ENST00000287936 DDHD2O94830 711 aa10.26□□□□□ -0.77
HMGCR-201ENST00000287936 DLDP09622 509 aaKnown RBP10.26□□□□□ -0.77
HMGCR-201ENST00000287936 CTSHP09668 335 aa10.26□□□□□ -0.77
HMGCR-201ENST00000287936 CYP2B6P20813 491 aa10.26□□□□□ -0.77
HMGCR-201ENST00000287936 RGS2P41220 211 aa10.26□□□□□ -0.77
HMGCR-201ENST00000287936 POLE2P56282 527 aa10.26□□□□□ -0.77
HMGCR-201ENST00000287936 ARHGAP8P85298 464 aa10.26□□□□□ -0.77
HMGCR-201ENST00000287936 BLMHQ13867 455 aa10.26□□□□□ -0.77
HMGCR-201ENST00000287936 DCLK2Q8N568 766 aa10.26□□□□□ -0.77
HMGCR-201ENST00000287936 ADAM32Q8TC27 787 aa10.26□□□□□ -0.77
HMGCR-201ENST00000287936 SLC7A6OSQ96CW6 309 aaPredicted RBP10.26□□□□□ -0.77
HMGCR-201ENST00000287936 FGD4Q96M96 766 aa10.26□□□□□ -0.77
HMGCR-201ENST00000287936 NMRK1Q9NWW6 199 aa10.26□□□□□ -0.77
HMGCR-201ENST00000287936 SIRPGQ9P1W8 387 aa10.26□□□□□ -0.77
HMGCR-201ENST00000287936 COL4A5P29400 1685 aa10.26□□□□□ -0.77
HMGCR-201ENST00000287936 SF3B1O75533 1304 aaKnown RBP eCLIP10.26□□□□□ -0.779e-7■■■■■ 57.4
HMGCR-201ENST00000287936 C2orf71A6NGG8 1288 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms