RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 KCNV2Q8TDN2 545 aa20.47■□□□□ 0.87
TIMP4-201ENST00000287814 ZNF212Q9UDV6 495 aa20.47■□□□□ 0.87
TIMP4-201ENST00000287814 TFR2Q9UP52 801 aa20.47■□□□□ 0.87
TIMP4-201ENST00000287814 MYO18AQ92614 2054 aaKnown RBP20.47■□□□□ 0.87
TIMP4-201ENST00000287814 CLDN11O75508 207 aa20.46■□□□□ 0.87
TIMP4-201ENST00000287814 PAPSS2O95340 614 aaPredicted RBP20.46■□□□□ 0.87
TIMP4-201ENST00000287814 DESP17661 470 aa20.46■□□□□ 0.87
TIMP4-201ENST00000287814 IL1R2P27930 398 aa20.46■□□□□ 0.87
TIMP4-201ENST00000287814 DMWDQ09019 674 aa20.46■□□□□ 0.87
TIMP4-201ENST00000287814 EIF4HQ15056 248 aaKnown RBP20.46■□□□□ 0.87
TIMP4-201ENST00000287814 CA9Q16790 459 aa20.46■□□□□ 0.87
TIMP4-201ENST00000287814 MBLAC2Q68D91 279 aa20.46■□□□□ 0.87
TIMP4-201ENST00000287814 TFAP2DQ7Z6R9 452 aa20.46■□□□□ 0.87
TIMP4-201ENST00000287814 NIPA2Q8N8Q9 360 aa20.46■□□□□ 0.87
TIMP4-201ENST00000287814 ZNF557Q8N988 423 aaPredicted RBP20.46■□□□□ 0.87
TIMP4-201ENST00000287814 SLC35G2Q8TBE7 412 aa20.46■□□□□ 0.87
TIMP4-201ENST00000287814 WFIKKN2Q8TEU8 576 aa20.46■□□□□ 0.87
TIMP4-201ENST00000287814 CYB5D2Q8WUJ1 264 aa20.46■□□□□ 0.87
TIMP4-201ENST00000287814 KCNH6Q9H252 994 aa20.46■□□□□ 0.87
TIMP4-201ENST00000287814 CACNA2D2Q9NY47 1150 aa20.46■□□□□ 0.87
TIMP4-201ENST00000287814 KIAA1522Q9P206 1035 aaPredicted RBP20.46■□□□□ 0.87
TIMP4-201ENST00000287814 UVRAGQ9P2Y5 699 aa20.46■□□□□ 0.87
TIMP4-201ENST00000287814 THAP10Q9P2Z0 257 aaPredicted RBP20.46■□□□□ 0.87
TIMP4-201ENST00000287814 PPARGC1AQ9UBK2 798 aaKnown RBP20.46■□□□□ 0.87
TIMP4-201ENST00000287814 IP6K2Q9UHH9 426 aa20.46■□□□□ 0.87
TIMP4-201ENST00000287814 FBXO4Q9UKT5 387 aa20.46■□□□□ 0.87
TIMP4-201ENST00000287814 TBC1D30Q9Y2I9 924 aa20.46■□□□□ 0.87
TIMP4-201ENST00000287814 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.45■□□□□ 0.86
TIMP4-201ENST00000287814 MYO1FO00160 1098 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 CSKP41240 450 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 MAGEA1P43355 309 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 ZNF177Q13360 481 aaPredicted RBP20.45■□□□□ 0.86
TIMP4-201ENST00000287814 PIGHQ14442 188 aaPredicted RBP20.45■□□□□ 0.86
TIMP4-201ENST00000287814 ACAP1Q15027 740 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 CRY1Q16526 586 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 PITRM1Q5JRX3 1037 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 EFHC2Q5JST6 749 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 CCDC117Q8IWD4 279 aaPredicted RBP20.45■□□□□ 0.86
TIMP4-201ENST00000287814 CHPFQ8IZ52 775 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 ACDQ96AP0 544 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 ALG14Q96F25 216 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 BAG1Q99933 345 aaPredicted RBP20.45■□□□□ 0.86
TIMP4-201ENST00000287814 SNRNP25Q9BV90 132 aaKnown RBP20.45■□□□□ 0.86
TIMP4-201ENST00000287814 USP18Q9UMW8 372 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 EPN1Q9Y6I3 576 aaPredicted RBP20.45■□□□□ 0.86
TIMP4-201ENST00000287814 CACNA1HO95180 2353 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 GOLGA6L3A6NEY3 463 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 EIF3CLB5ME19 914 aaKnown RBP20.45■□□□□ 0.86
TIMP4-201ENST00000287814 TIMM44O43615 452 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 NDUFA10O95299 355 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 NTSR1P30989 418 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 L1CAMP32004 1257 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 PCK1P35558 622 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 IL12RB1P42701 662 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 PXNP49023 591 aaPredicted RBP20.45■□□□□ 0.86
TIMP4-201ENST00000287814 AIF1P55008 147 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 SEMA3BQ13214 749 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 ZNF234Q14588 700 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 PTPRNQ16849 979 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 PLEKHG6Q3KR16 790 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 HSF5Q4G112 596 aaPredicted RBP20.45■□□□□ 0.86
TIMP4-201ENST00000287814 ERMARDQ5T6L9 678 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 TXNRD3NBQ6F5E7 133 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 TTC17Q96AE7 1141 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 ERLEC1Q96DZ1 483 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 HHIPQ96QV1 700 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 EIF3CQ99613 913 aaKnown RBP20.45■□□□□ 0.86
TIMP4-201ENST00000287814 ZYG11BQ9C0D3 744 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 NDFIP2Q9NV92 336 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 INTUQ9ULD6 942 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 SLC8A2Q9UPR5 921 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 REXO2Q9Y3B8 237 aaKnown RBP20.45■□□□□ 0.86
TIMP4-201ENST00000287814 PCDHA13Q9Y5I0 950 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 OR51B4Q9Y5P0 310 aa20.45■□□□□ 0.86
TIMP4-201ENST00000287814 PRPSAP2O60256 369 aa20.44■□□□□ 0.86
TIMP4-201ENST00000287814 CYLC1P35663 651 aaPredicted RBP20.44■□□□□ 0.86
TIMP4-201ENST00000287814 CTSOP43234 321 aaPredicted RBP20.44■□□□□ 0.86
TIMP4-201ENST00000287814 ENPP2Q13822 863 aa20.44■□□□□ 0.86
TIMP4-201ENST00000287814 RWDD4Q6NW29 188 aaKnown RBP20.44■□□□□ 0.86
TIMP4-201ENST00000287814 AP4E1Q9UPM8 1137 aa20.44■□□□□ 0.86
TIMP4-201ENST00000287814 STON1Q9Y6Q2 735 aa20.44■□□□□ 0.86
TIMP4-201ENST00000287814 A0A1W2PQF6 199 aa20.43■□□□□ 0.86
TIMP4-201ENST00000287814 POLR2EP19388 210 aaKnown RBP20.43■□□□□ 0.86
TIMP4-201ENST00000287814 PLK1P53350 603 aa20.43■□□□□ 0.86
TIMP4-201ENST00000287814 KCNT1Q5JUK3 1230 aa20.43■□□□□ 0.86
TIMP4-201ENST00000287814 EOGTQ5NDL2 527 aa20.43■□□□□ 0.86
TIMP4-201ENST00000287814 KIAA1211LQ6NV74 962 aa20.43■□□□□ 0.86
TIMP4-201ENST00000287814 NLRP14Q86W24 1093 aa20.43■□□□□ 0.86
TIMP4-201ENST00000287814 UCMAQ8WVF2 138 aa20.43■□□□□ 0.86
TIMP4-201ENST00000287814 NELL1Q92832 810 aa20.43■□□□□ 0.86
TIMP4-201ENST00000287814 GABRG3Q99928 467 aa20.43■□□□□ 0.86
TIMP4-201ENST00000287814 FEM1AQ9BSK4 669 aa20.43■□□□□ 0.86
TIMP4-201ENST00000287814 DHX35Q9H5Z1 703 aaKnown RBP20.43■□□□□ 0.86
TIMP4-201ENST00000287814 CD248Q9HCU0 757 aa20.43■□□□□ 0.86
TIMP4-201ENST00000287814 RAD54BQ9Y620 910 aa20.43■□□□□ 0.86
TIMP4-201ENST00000287814 VPS13AQ96RL7 3174 aa20.43■□□□□ 0.86
TIMP4-201ENST00000287814 RCCD1A6NED2 376 aa20.42■□□□□ 0.86
TIMP4-201ENST00000287814 CREB3O43889 395 aa20.42■□□□□ 0.86
TIMP4-201ENST00000287814 PROSCO94903 275 aa20.42■□□□□ 0.86
TIMP4-201ENST00000287814 DLDP09622 509 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms