RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 CADM3Q8N126 398 aa9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 JOSD2Q8TAC2 188 aa9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 SPATA18Q8TC71 538 aa9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 HM13Q8TCT9 377 aa9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 TMC2Q8TDI7 906 aa9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 TAMM41Q96BW9 452 aa9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 FBXL18Q96ME1 805 aa9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 DOK1Q99704 481 aa9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 FAM213AQ9BRX8 229 aa9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 TCHPQ9BT92 498 aa9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 HGH1Q9BTY7 390 aa9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 OSBPL11Q9BXB4 747 aa9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 MUC3BQ9H195 1237 aa9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 TDRD3Q9H7E2 651 aaKnown RBP9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 HOMER2Q9NSB8 354 aa9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 GIN1Q9NXP7 522 aa9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 TMEM216Q9P0N5 145 aa9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 POU2F3Q9UKI9 436 aa9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 CNOT11Q9UKZ1 510 aaKnown RBP9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 ERGIC3Q9Y282 383 aa9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 PSME4Q14997 1843 aa9.4□□□□□ -0.9
HMGCLL1-201ENST00000274901 DDTLA6NHG4 134 aaPredicted RBP9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 A6NL46 340 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 GIPC1O14908 333 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 MAPTP10636 758 aaKnown RBP9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 MYL4P12829 197 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 HARS2P49590 506 aaKnown RBP9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 RAB15P59190 212 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 PSMC1P62191 440 aaKnown RBP9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 IKQ13123 557 aaPredicted RBP9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 RAB39AQ14964 217 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 UGCGQ16739 394 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 RAB6CQ53S08 254 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 ZNF534Q76KX8 674 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 ENOSF1Q7L5Y1 443 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 VASH1Q7L8A9 365 aaPredicted RBP9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 RFX6Q8HWS3 928 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 ZC3H7AQ8IWR0 971 aaKnown RBP9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 TNS4Q8IZW8 715 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 ZNF786Q8N393 782 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 WDTC1Q8N5D0 677 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 PCYOX1LQ8NBM8 494 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 TMEM161BQ8NDZ6 487 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 TRPC4APQ8TEL6 797 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 ACDQ96AP0 544 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 NSMCE3Q96MG7 304 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 ZDHHC15Q96MV8 337 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 ANKRD60Q9BZ19 345 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 RAB6CQ9H0N0 254 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 WDR41Q9HAD4 459 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 TRPV5Q9NQA5 729 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 DDX56Q9NY93 547 aaKnown RBP9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 PCSK1NQ9UHG2 260 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 SFMBT1Q9UHJ3 866 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 SLC8A2Q9UPR5 921 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 PSAT1Q9Y617 370 aa9.4□□□□□ -0.91
HMGCLL1-201ENST00000274901 DYNC1LI2O43237 492 aaPredicted RBP9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 CLIC3O95833 236 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 NAT1P18440 290 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 OSBPP22059 807 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 DCKP27707 260 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 CUL2Q13617 745 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 RGS21Q2M5E4 152 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 LDLRAP1Q5SW96 308 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 GALNT18Q6P9A2 607 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 DARS2Q6PI48 645 aaKnown RBP9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 CHST15Q7LFX5 561 aaPredicted RBP9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 EMC1Q8N766 993 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 Q8N9G6 341 aaPredicted RBP9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 DCAF4Q8WV16 495 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 SERPINI1Q99574 410 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 NPAS2Q99743 824 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 FERMT1Q9BQL6 677 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 MXRA8Q9BRK3 442 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 HERC2P3Q9BVR0 1158 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 NOL11Q9H8H0 719 aaKnown RBP9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 ARHGAP28Q9P2N2 729 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 GMPR2Q9P2T1 348 aaKnown RBP9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 DNMT3BQ9UBC3 853 aaKnown RBP9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 SLC9A2Q9UBY0 812 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 FAM198AQ9UFP1 575 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 GNPTGQ9UJJ9 305 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 NUB1Q9Y5A7 615 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 ARID2Q68CP9 1835 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 A0A1W2PQ67 120 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 TRIM64BA6NI03 449 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 C9IYK1 514 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 ZNF701M0R085 212 aaPredicted RBP9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 EIF3FO00303 357 aaPredicted RBP9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 NRP1O14786 923 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 CHADO15335 359 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 SEC24DO94855 1032 aaPredicted RBP9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 VAPBO95292 243 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 NDUFB10O96000 172 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 JUNP05412 331 aaKnown RBP9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 RALBP11234 206 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 ME2P23368 584 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 TRAF2Q12933 501 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 MOGQ16653 247 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 TREML2Q5T2D2 321 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms