RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 NIFKQ9BYG3 293 aaKnown RBP14.27□□□□□ -0.13
CDH3-201ENST00000264012 NMRAL1Q9HBL8 299 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 PRKAR2AP13861 404 aaKnown RBP14.27□□□□□ -0.13
CDH3-201ENST00000264012 GOT1P17174 413 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 PRIM2P49643 509 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 SERPINH1P50454 418 aaKnown RBP14.27□□□□□ -0.13
CDH3-201ENST00000264012 CDK7P50613 346 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 IKBKEQ14164 716 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 NR6A1Q15406 480 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 LLGL2Q6P1M3 1020 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 JOSD2Q8TAC2 188 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 ELOVL6Q9H5J4 265 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 DHX33Q9H6R0 707 aaKnown RBP14.27□□□□□ -0.13
CDH3-201ENST00000264012 FAM105AQ9NUU6 356 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 ANKRD6Q9Y2G4 727 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 PTCH2Q9Y6C5 1203 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 AKAP12Q02952 1782 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 COL1A2P08123 1366 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 RPA3P35244 121 aaPredicted RBP14.26□□□□□ -0.13
CDH3-201ENST00000264012 MATKP42679 507 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 ABCG1P45844 678 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 PRKAA2P54646 552 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 ILF2Q12905 390 aaKnown RBP14.26□□□□□ -0.13
CDH3-201ENST00000264012 CAMK2GQ13555 558 aaPredicted RBP14.26□□□□□ -0.13
CDH3-201ENST00000264012 PTPN20Q4JDL3 420 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 ATP6AP1LQ52LC2 224 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 OTOAQ7RTW8 1153 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 NKX2-3Q8TAU0 364 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 OXNAD1Q96HP4 312 aaPredicted RBP14.26□□□□□ -0.13
CDH3-201ENST00000264012 MRPL45Q9BRJ2 306 aaKnown RBP14.26□□□□□ -0.13
CDH3-201ENST00000264012 GIT1Q9Y2X7 761 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 SF3B1O75533 1304 aaKnown RBP eCLIP14.26□□□□□ -0.13
CDH3-201ENST00000264012 SMIM35A0A1B0GVV1 85 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 CLDN5O00501 218 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 PHGDHO43175 533 aaKnown RBP14.26□□□□□ -0.13
CDH3-201ENST00000264012 ALOX15P16050 662 aaPredicted RBP14.26□□□□□ -0.13
CDH3-201ENST00000264012 CHKAP35790 457 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 PEX5P50542 639 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 TSHZ1Q6ZSZ6 1077 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 CATSPER2Q96P56 530 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 ACOX2Q99424 681 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 SENP6Q9GZR1 1112 aaPredicted RBP14.26□□□□□ -0.13
CDH3-201ENST00000264012 BTBD7Q9P203 1132 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 BTBD19C9JJ37 291 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 HNRNPRO43390 633 aaKnown RBP14.26□□□□□ -0.13
CDH3-201ENST00000264012 ALBP02768 609 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 MMP3P08254 477 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 DARSP14868 501 aaKnown RBP14.26□□□□□ -0.13
CDH3-201ENST00000264012 SERPINB3P29508 390 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 HALP42357 657 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 RAP1GAP2Q684P5 730 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 C16orf59Q7L2K0 433 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 DEFB107AQ8IZN7 70 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 ANKRD27Q96NW4 1050 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 PPP1R10Q96QC0 940 aaKnown RBP14.26□□□□□ -0.13
CDH3-201ENST00000264012 LHX5Q9H2C1 402 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 RMND5AQ9H871 391 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 FAM95CA0A1B0GW59 222 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 ZNF862O60290 1169 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 BAIAP3O94812 1187 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 NFKB1P19838 968 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 ICAM3P32942 547 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 MRPS5P82675 430 aaKnown RBP14.26□□□□□ -0.13
CDH3-201ENST00000264012 DSG1Q02413 1049 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 CHADLQ6NUI6 762 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 HOMEZQ8IX15 550 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 TOP6BLQ8N6T0 577 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 THAP11Q96EK4 314 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 YIPF2Q9BWQ6 316 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 DLGAP2Q9P1A6 1054 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 APPL1Q9UKG1 709 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 IPPQ9Y573 584 aa14.26□□□□□ -0.13
CDH3-201ENST00000264012 ARIH2O95376 493 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 GUCA1CO95843 209 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 IGSF6O95976 241 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 C4BPAP04003 597 aaKnown RBP14.25□□□□□ -0.13
CDH3-201ENST00000264012 ARL2P36404 184 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 CCNG1P51959 295 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 HPCAP84074 193 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 PCID2Q5JVF3 399 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 C9orf57Q5W0N0 161 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 ARMC6Q6NXE6 501 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 C16orf46Q6P387 395 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 TRIM48Q8IWZ4 208 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 KYQ8NBH2 561 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 PWWP2AQ96N64 755 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 VTI1BQ9UEU0 232 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 DERAQ9Y315 318 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 MAFBQ9Y5Q3 323 aaPredicted RBP14.25□□□□□ -0.13
CDH3-201ENST00000264012 SNX13Q9Y5W8 968 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 LMO7Q8WWI1 1683 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 ABHD2P08910 425 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 ERCC2P18074 760 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 HSPA13P48723 471 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 DAB2P98082 770 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 ANKS6Q68DC2 871 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 TMPRSS6Q8IU80 811 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 CCT7Q99832 543 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 DUSP16Q9BY84 665 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 CST3P01034 146 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms