RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 PANX3Q96QZ0 392 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 UBP1Q9NZI7 540 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 CTNNAL1Q9UBT7 734 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 GOLGA8TH3BQL2 631 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 ALADP13716 330 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 BRCC3P46736 316 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 PCDH18Q9HCL0 1135 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 PLCH1Q4KWH8 1693 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 B2RBV5 119 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 TSPAN3O60637 253 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 COL6A1P12109 1028 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 ERCC2P18074 760 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 ADSSP30520 456 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 COPAP53621 1224 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 SLC10A6Q3KNW5 377 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 C6orf10Q5SRN2 563 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 IKZF4Q9H2S9 585 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 KLC4Q9NSK0 619 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 VTI1BQ9UEU0 232 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 STXBP5LQ9Y2K9 1186 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 NUDT17P0C025 328 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 TAS2R40P59535 323 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 PRKAA1Q13131 559 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 CDCA2Q69YH5 1023 aaPredicted RBP15.31■□□□□ 0.04
UBE4B-201ENST00000253251 PRPF39Q86UA1 669 aaKnown RBP15.31■□□□□ 0.04
UBE4B-201ENST00000253251 NPAS4Q8IUM7 802 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 NOCTQ9UK39 431 aaKnown RBP15.31■□□□□ 0.04
UBE4B-201ENST00000253251 ARHGAP26Q9UNA1 814 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 UBR2Q8IWV8 1755 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 A0A087X1B8 175 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 POLR2EP19388 210 aaKnown RBP15.31■□□□□ 0.04
UBE4B-201ENST00000253251 CTNNB1P35222 781 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 PRKCZQ05513 592 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 ADCK2Q7Z695 626 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 SGF29Q96ES7 293 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 PRDM12Q9H4Q4 367 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 STN1Q9H668 368 aaKnown RBP15.31■□□□□ 0.04
UBE4B-201ENST00000253251 WRAP73Q9P2S5 460 aaPredicted RBP15.31■□□□□ 0.04
UBE4B-201ENST00000253251 SRRDQ9UH36 339 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 TMCO1Q9UM00 188 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 MAP2K7O14733 419 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 MDM4O15151 490 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 CALCAP01258 141 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 FAM153BP0C7A2 387 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 SSTR1P30872 391 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 ADRA1BP35368 520 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 SCNN1AP37088 669 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 MAP3K10Q02779 954 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 FAM153CQ494X1 144 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 ARMC6Q6NXE6 501 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 LONP2Q86WA8 852 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 ACMSDQ8TDX5 336 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 OTUB1Q96FW1 271 aaPredicted RBP15.31■□□□□ 0.04
UBE4B-201ENST00000253251 CPXM1Q96SM3 734 aa15.31■□□□□ 0.04
UBE4B-201ENST00000253251 INHAP05111 366 aa15.3■□□□□ 0.04
UBE4B-201ENST00000253251 CCNB1P14635 433 aa15.3■□□□□ 0.04
UBE4B-201ENST00000253251 SNRPD1P62314 119 aaKnown RBP15.3■□□□□ 0.04
UBE4B-201ENST00000253251 ZBTB41Q5SVQ8 909 aa15.3■□□□□ 0.04
UBE4B-201ENST00000253251 RAP1GAP2Q684P5 730 aa15.3■□□□□ 0.04
UBE4B-201ENST00000253251 GLT6D1Q7Z4J2 308 aa15.3■□□□□ 0.04
UBE4B-201ENST00000253251 PTAR1Q7Z6K3 402 aaPredicted RBP15.3■□□□□ 0.04
UBE4B-201ENST00000253251 ICA1LQ8NDH6 482 aa15.3■□□□□ 0.04
UBE4B-201ENST00000253251 EIF2AQ9BY44 585 aaKnown RBP15.3■□□□□ 0.04
UBE4B-201ENST00000253251 UTP6Q9NYH9 597 aaKnown RBP15.3■□□□□ 0.04
UBE4B-201ENST00000253251 ENO3P13929 434 aaPredicted RBP15.3■□□□□ 0.04
UBE4B-201ENST00000253251 LILRA4P59901 499 aa15.3■□□□□ 0.04
UBE4B-201ENST00000253251 USP45Q70EL2 814 aa15.3■□□□□ 0.04
UBE4B-201ENST00000253251 OOSP2Q86WS3 158 aa15.3■□□□□ 0.04
UBE4B-201ENST00000253251 GIMAP4Q9NUV9 329 aa15.3■□□□□ 0.04
UBE4B-201ENST00000253251 LNPEPQ9UIQ6 1025 aa15.3■□□□□ 0.04
UBE4B-201ENST00000253251 TLR5O60602 858 aa15.3■□□□□ 0.04
UBE4B-201ENST00000253251 TRIM13O60858 407 aa15.3■□□□□ 0.04
UBE4B-201ENST00000253251 EEF1B2P24534 225 aaKnown RBP15.3■□□□□ 0.04
UBE4B-201ENST00000253251 CSE1LP55060 971 aaKnown RBP15.3■□□□□ 0.04
UBE4B-201ENST00000253251 SKOR1P84550 965 aa15.3■□□□□ 0.04
UBE4B-201ENST00000253251 PPIGQ13427 754 aaKnown RBP eCLIP15.3■□□□□ 0.044e-7■■■□□ 16.7
UBE4B-201ENST00000253251 SLC51AQ86UW1 340 aa15.3■□□□□ 0.04
UBE4B-201ENST00000253251 PIP4K2CQ8TBX8 421 aa15.3■□□□□ 0.04
UBE4B-201ENST00000253251 SLC9A7Q96T83 725 aa15.3■□□□□ 0.04
UBE4B-201ENST00000253251 GTF2IRD1Q9UHL9 959 aa15.3■□□□□ 0.04
UBE4B-201ENST00000253251 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.29■□□□□ 0.04
UBE4B-201ENST00000253251 DDX3YO15523 660 aaKnown RBP15.29■□□□□ 0.04
UBE4B-201ENST00000253251 DNAJC8O75937 253 aaPredicted RBP15.29■□□□□ 0.04
UBE4B-201ENST00000253251 RPSAP08865 295 aaKnown RBP15.29■□□□□ 0.04
UBE4B-201ENST00000253251 HSPA1AP0DMV8 641 aaKnown RBP15.29■□□□□ 0.04
UBE4B-201ENST00000253251 HSPA1BP0DMV9 641 aaKnown RBP15.29■□□□□ 0.04
UBE4B-201ENST00000253251 PPP3CCP48454 512 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 MARCKSL1P49006 195 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 NOMO1Q15155 1222 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 JOSD2Q8TAC2 188 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 ALG3Q92685 438 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 CENPTQ96BT3 561 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 BTN2A3PQ96KV6 586 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 RGS18Q9NS28 235 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 EVPLLA8MZ36 301 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 PEX10O60683 326 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 SNUPNO95149 360 aaKnown RBP15.29■□□□□ 0.04
UBE4B-201ENST00000253251 VAPBO95292 243 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 OR56A5P0C7T3 313 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 PIK3CGP48736 1102 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms