RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Serpina3aQ6P4P1 422 aa7.41□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Mfn1Q811U4 741 aa7.41□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Pphln1Q8K2H1 381 aaKnown RBP7.41□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Lgals12Q91VD1 314 aa7.41□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Kif19Q99PT9 997 aa7.41□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Raver1Q9CW46 748 aaKnown RBP7.41□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Oma1Q9D8H7 521 aa7.41□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Tbx18Q9EPZ6 613 aa7.41□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Tubb1A2AQ07 451 aa7.41□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Olfr694K7N641 315 aa7.41□□□□□ -1.22
Scn3a-201ENSMUST00000066432 PrkchP23298 683 aa7.41□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Gxylt1Q3UHH8 404 aa7.41□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Rhox12Q4TU81 186 aa7.41□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Exoc3l1Q8BI71 739 aa7.41□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Tubgcp5Q8BKN5 1024 aa7.41□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Bhlhe22Q8C6A8 355 aa7.41□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Sh3bp5lQ99LH9 392 aa7.41□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Ndufb5Q9CQH3 189 aa7.41□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Lrrc17Q9CXD9 443 aa7.41□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Gm28168A0A087WNP1 180 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Cylc2B1AWN8 422 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Siah3B2RWG3 268 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Bbip1J3QMK2 67 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Fgf15O35622 218 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Nckap1P28660 1128 aaKnown RBP7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Polr1bP70700 1135 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Meis2P97367 477 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Colec11Q3SXB8 272 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Dsg1bQ7TSF1 1060 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Thap3Q8BJ25 218 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Mapkap1Q8BKH7 522 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Osbpl2Q8BX94 484 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Rxfp2Q91ZZ5 737 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Trps1Q925H1 1281 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 PmpcbQ9CXT8 489 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Kpna7C0LLJ0 499 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Vmn2r100E9QAZ9 850 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 MelkQ61846 643 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 PdgfrlQ6PE55 375 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Q8CCC3 530 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 DarsQ922B2 501 aaKnown RBP7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Slc12a9Q99MR3 914 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Mis18aQ9CZJ6 204 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Osbpl3Q9DBS9 855 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Natd1Q9DBW3 110 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Nif3l1Q9EQ80 376 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 4930402K13RikB1AW18 415 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Gm382B1AXN3 1250 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Gm6205E9PZS2 359 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 TnfP06804 235 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 SarsP26638 512 aaKnown RBP7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Pou2f3P31362 431 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Ddx6P54823 483 aaKnown RBP7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Frg1P97376 258 aaKnown RBP7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Foxr1Q3UTB7 268 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Fam46cQ5SSF7 391 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Ubp1Q811S7 540 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Clec4gQ8BNX1 294 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Gm6367Q8C6L9 287 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Acsl5Q8JZR0 683 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Ppp1r11Q8K1L5 131 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Pacs1Q8K212 961 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Col23a1Q8K4G2 532 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Syt5Q9R0N5 386 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Cry2Q9R194 592 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 UprtB1AVZ0 310 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Vmn2r27D3YUK6 857 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Erich1E9PY43 332 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Vmn2r46L7N282 809 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Uchl4P58321 233 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Ubxn7Q6P5G6 467 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Ticam2Q8BJQ4 232 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Rprd1bQ9CSU0 326 aaKnown RBP7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Dcp2Q9CYC6 422 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Msl3Q9WVG9 525 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Gm13089A2AGW7 455 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Dpy19l4A2AJQ3 722 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Vmn2r104E9Q2J5 860 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Calhm3J3QMI4 347 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Vmn2r39L7N2E5 861 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 PtgisO35074 501 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Nol4P60954 483 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Usp49Q6P9L4 685 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Usp1Q8BJQ2 784 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Arhgap25Q8BYW1 648 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Dnajc19Q9CQV7 116 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Map3k6Q9WTR2 1291 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Fads2Q9Z0R9 444 aaKnown RBP7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Plch1Q4KWH5 1682 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Lrp5Q91VN0 1614 aa7.4□□□□□ -1.22
Scn3a-201ENSMUST00000066432 Col5a2Q3U962 1497 aa7.4□□□□□ -1.23
Scn3a-201ENSMUST00000066432 Adgra3Q7TT36 1310 aa7.4□□□□□ -1.23
Scn3a-201ENSMUST00000066432 NuggcD3YWJ0 796 aa7.4□□□□□ -1.23
Scn3a-201ENSMUST00000066432 Hk2O08528 917 aaKnown RBP7.4□□□□□ -1.23
Scn3a-201ENSMUST00000066432 CraddO88843 199 aa7.4□□□□□ -1.23
Scn3a-201ENSMUST00000066432 Cyp2d9P11714 504 aa7.4□□□□□ -1.23
Scn3a-201ENSMUST00000066432 TankP70347 448 aa7.4□□□□□ -1.23
Scn3a-201ENSMUST00000066432 Grid2ipQ0QWG9 1203 aa7.4□□□□□ -1.23
Scn3a-201ENSMUST00000066432 Znf112Q0VAW7 879 aa7.4□□□□□ -1.23
Scn3a-201ENSMUST00000066432 Garnl3Q3V0G7 1038 aa7.4□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms