RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Hsd17b7O88736 334 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Cd160O88875 185 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gnat1P20612 350 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gabrr2P56476 465 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Opa1P58281 960 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Smpdl3aP70158 445 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Cntn3Q07409 1028 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Eif2b4Q61749 524 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Paqr9Q6TCG2 375 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Naaladl1Q7M758 745 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 MroQ7TNB4 248 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Olfr1128Q7TR47 311 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Nek5Q7TSC3 627 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ccdc134Q8C7V8 229 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Aldh4a1Q8CHT0 562 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Hars2Q99KK9 505 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Bzw1Q9CQC6 419 aaKnown RBP8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ndufb5Q9CQH3 189 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Slc25a19Q9DAM5 318 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Orc1Q9Z1N2 840 aaKnown RBP8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Szt2A2A9C3 3431 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Srsf11E9Q6E5 511 aaKnown RBP8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Axin1O35625 863 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Adam15O88839 864 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Sox13Q04891 613 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Znf112Q0VAW7 879 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Grm5Q3UVX5 1203 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Grxcr1Q50H32 290 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Pla2g4dQ50L43 825 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Shroom1Q5SX79 823 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Orc2Q60862 576 aaKnown RBP8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gngt1Q61012 74 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 PapolaQ61183 739 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Zfp454Q80Y34 536 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Usp1Q8BJQ2 784 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Slc7a4Q8BLQ7 635 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Tceal5Q8CCT4 200 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Arhgap18Q8K0Q5 663 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Champ1Q8K327 802 aaKnown RBP8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Cplx3Q8R1B5 158 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 TfQ921I1 697 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Abcf2Q99LE6 628 aaKnown RBP8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Marc1Q9CW42 340 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Rec114Q9CWH4 259 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 QpctQ9CYK2 362 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ola1Q9CZ30 396 aaKnown RBP8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 TarsQ9D0R2 722 aaKnown RBP8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 MceeQ9D1I5 178 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Polr3hQ9D2C6 204 aaKnown RBP8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ccdc103Q9D9P2 237 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Tacc3Q9JJ11 631 aa8.94□□□□□ -0.98
Trim39-201ENSMUST00000042717 Tp53bp1P70399 1969 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 C7D3YXF5 845 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Zbtb11G5E8B9 1050 aaKnown RBP8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Vmn2r67K7N6T2 851 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gm21962L7N280 338 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gp6P0C191 313 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Sstr1P30873 391 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Il12aP43431 215 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Arl4cP61208 192 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 ItkQ03526 625 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Tmprss11aQ3UQ41 389 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Tdrd5Q5VCS6 1040 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Dpy19l3Q71B07 716 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Itpk1Q8BYN3 419 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Pak5Q8C015 719 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Proser2Q8C5R2 471 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Pdik1lQ8QZR7 341 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Dact1Q8R4A3 778 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Lrrc46Q9DAP0 323 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Krt71Q9R0H5 524 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Fut8Q9WTS2 575 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Rpl9-ps6A0A140T8T4 192 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Vmn2r115E9Q0E7 857 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Capn2O08529 700 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Xbp1O35426 267 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Art2bO35975 289 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Prkag1O54950 330 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Il27raO70394 623 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Cldn2O88552 230 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Coro1aO89053 461 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Cd247P24161 164 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Rpl9P51410 192 aaKnown RBP8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Rps24P62849 133 aaKnown RBP8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Npas2P97460 816 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Krt32Q62168 407 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 PdgfrlQ6PE55 375 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Rnf187Q8BFX1 236 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Trerf1Q8BXJ2 1205 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Pde10aQ8CA95 790 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Acsl5Q8JZR0 683 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Vmn1r188Q8K3N2 308 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Cdc26Q99JP4 85 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Rwdd4Q9CPR1 188 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 MkksQ9JI70 570 aa8.93□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gm28510A0A087WP28 240 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Zfp626A0A0U1RQ84 676 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Tmem215A7E1Z1 235 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 JrklB2RRL2 523 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Olfr414E9Q5P8 317 aa8.92□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms