RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Foxd4Q60688 444 aa15.33■□□□□ 0.04
Nup54-201ENSMUST00000038514 Exoc3l4Q6DIA2 721 aa15.33■□□□□ 0.04
Nup54-201ENSMUST00000038514 Cnksr2Q80YA9 1032 aa15.33■□□□□ 0.04
Nup54-201ENSMUST00000038514 Arhgap25Q8BYW1 648 aa15.33■□□□□ 0.04
Nup54-201ENSMUST00000038514 Ston2Q8BZ60 895 aa15.33■□□□□ 0.04
Nup54-201ENSMUST00000038514 Ipo11Q8K2V6 975 aa15.33■□□□□ 0.04
Nup54-201ENSMUST00000038514 Vopp1Q8R1C3 172 aa15.33■□□□□ 0.04
Nup54-201ENSMUST00000038514 Sh3kbp1Q8R550 709 aaKnown RBP15.33■□□□□ 0.04
Nup54-201ENSMUST00000038514 Olfr397Q8VEZ6 315 aa15.33■□□□□ 0.04
Nup54-201ENSMUST00000038514 Catsper1Q91ZR5 686 aa15.33■□□□□ 0.04
Nup54-201ENSMUST00000038514 Spata1Q9D5R4 444 aa15.33■□□□□ 0.04
Nup54-201ENSMUST00000038514 4930469K13RikA0A286YDB2 92 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Daw1D3Z7A5 415 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 DgkdE9PUQ8 1220 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Gm7942L7N277 499 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 AmacrO09174 381 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Neu1O35657 409 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Mtco1P00397 514 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Il12aP43431 215 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 StamP70297 548 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Msx2Q03358 267 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Arl14Q3SXC5 192 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Pyroxd1Q3TMV7 498 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Mettl17Q3U2U7 461 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 1810049J17RikQ3V2G9 153 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 PkdccQ5RJI4 492 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Myo1gQ5SUA5 1024 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 ScinQ60604 715 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Gramd1bQ80TI0 738 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Zbtb41Q811F1 908 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Ppm1lQ8BHN0 360 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Brat1Q8C3R1 822 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Plbd1Q8VCI0 550 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Slc25a3Q8VEM8 357 aaKnown RBP15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 ProzQ9CQW3 399 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Clic3Q9D7P7 237 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Ing2Q9ESK4 281 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Akt3Q9WUA6 479 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Nme3Q9WV85 169 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Gm3264L7N2C5 238 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Itgb3O54890 787 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Btg3P50615 252 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Nek10Q3UGM2 1111 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Gpr65Q61038 337 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Scaf8Q6DID3 1268 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 DgkqQ6P5E8 934 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Fads6Q80UG1 342 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Armc12Q80X86 340 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Wscd1Q80XH4 572 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Pqlc1Q80XM9 271 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Sec24bQ80ZX0 1251 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Xylt1Q811B1 953 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Fnbp1lQ8K012 605 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Ace2Q8R0I0 805 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Vmn1r213Q8R278 384 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Me2Q99KE1 589 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Zmat2Q9CPW7 199 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 DenrQ9CQJ6 198 aaKnown RBP15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Cox16Q9CR63 106 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Tubgcp4Q9D4F8 667 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Gpc1Q9QZF2 557 aa15.32■□□□□ 0.04
Nup54-201ENSMUST00000038514 Gm6657A0A1B0GRJ3 277 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Spin2dB1B0R2 236 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Vmn2r100E9QAZ9 850 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Mfsd4b4J3QNS5 503 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Prl3b1P09586 222 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 MutP16332 748 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Cdo1P60334 200 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Stt3bQ3TDQ1 823 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Zbtb16Q3UQ17 673 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Tspan18Q80WR1 248 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 GcshQ91WK5 170 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Afg3l1Q920A7 789 aaKnown RBP15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Prpf19Q99KP6 504 aaKnown RBP15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Tbc1d15Q9CXF4 671 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Smim10l2aA0A0B4J1F8 78 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Gm4302E9PX25 294 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Ifi206G3UZV2 921 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Hmgxb3G3X9M3 1254 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Dnmt3bO88509 859 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Mcpt1P11034 246 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Scd1P13516 355 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Lamp2P17047 415 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Tbxas1P36423 533 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Vps45P97390 570 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Slc18a2Q8BRU6 517 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Nlrp4bQ8C6J9 863 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Nsmce2Q91VT1 247 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Csde1Q91W50 798 aaKnown RBP15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Sike1Q9CPR7 207 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Serbp1Q9CY58 407 aaKnown RBP15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Cab39lQ9DB16 337 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Dnaja2Q9QYJ0 412 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Hs6st3Q9QYK4 470 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Map3k14Q9WUL6 942 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Cpxm1Q9Z100 722 aa15.31■□□□□ 0.04
Nup54-201ENSMUST00000038514 Erich2E9Q1A6 463 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Acot1O55137 419 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Krt6aP50446 553 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Slc12a1P55014 1095 aa15.3■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms