RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Olfr456B2RT27 312 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Prdm15E9Q8T2 1174 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Kdelc2G5E897 503 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gm8011K7N6Y5 207 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Dpysl4O35098 572 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 SagP20443 403 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Htr2cP34968 459 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 4930502E18RikQ14BQ3 236 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gpr65Q61038 337 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Szrd1Q6NXN1 152 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gpr141Q7TQP0 305 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Mterf4Q8BVN4 346 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Fbxl5Q8C2S5 690 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Fbxo43Q8CDI2 640 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Adam32Q8K410 754 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tmprss4Q8VCA5 435 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Olfr458Q8VF80 313 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Olfr457Q8VGP5 313 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Paip2bQ91W45 136 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Pdk3Q922H2 415 aaKnown RBP10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 CmasQ99KK2 432 aaKnown RBP10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tpgs1Q99MS8 303 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Dcp2Q9CYC6 422 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 PrccQ9EQC8 491 aaKnown RBP10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Nup50Q9JIH2 466 aaKnown RBP10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Trim12cD3Z3L3 497 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tars2Q3UQ84 723 aaKnown RBP10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tnfaip2Q61333 691 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ntan1Q64311 310 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 RadilQ69Z89 1099 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Suz12Q80U70 741 aaKnown RBP10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 BicralQ8CHH5 1074 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Slc47a1Q8K0H1 567 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Fbxo21Q8VDH1 627 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Olfr532Q8VGT4 309 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Cpt1bQ924X2 772 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Scgb2b21A0A087WQA9 112 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tbkbp1A2A9T0 611 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Mroh5E9PUJ8 762 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Nfatc2ipO09130 412 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Cops5O35864 334 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Epb41l4aP52963 686 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Faf2Q3TDN2 445 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Slc9b2Q5BKR2 547 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Fbxw10Q5SUS0 1030 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 VwdeQ6DFV8 926 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 DgkqQ6P5E8 934 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 ChfrQ810L3 664 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Scn3bQ8BHK2 215 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tspan14Q8QZY6 270 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Dis3Q9CSH3 958 aaKnown RBP10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ndc80Q9D0F1 642 aaKnown RBP10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 RhoaQ9QUI0 193 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Psma4Q9R1P0 261 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 TfgQ9Z1A1 397 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Lrp6O88572 1613 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Pgap3A2A559 320 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Rrn3B2RS91 656 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Mbl1P39039 239 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Erp29P57759 262 aaKnown RBP10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Eif1adQ3THJ3 170 aaKnown RBP10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Snx27Q3UHD6 539 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Chst10Q6PGK7 356 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Kctd15Q8K0E1 283 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Unc93b1Q8VCW4 598 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Olfr1499Q8VG65 314 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Caskin2Q8VHK1 1201 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Pcdhb19Q91Y01 801 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Syt12Q920N7 421 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Echdc3Q9D7J9 300 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Mzb1Q9D8I1 188 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Rnft1Q9DCN7 395 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Hsd3b7Q9EQC1 369 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tnfsf13bQ9WU72 309 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 H2afb2S4R1M3 115 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Dlg5E9Q9R9 1921 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 D3Z070 196 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Trdmt1O55055 415 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tulp2P46686 562 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 McuQ3UMR5 350 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gpr156Q6PCP7 798 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Arhgap26Q6ZQ82 814 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Teddm1aQ810U2 305 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Nxnl1Q8VC33 217 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gramd1aQ8VEF1 722 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tmed5Q9CXE7 229 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ap3m1Q9JKC8 418 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ptk2bQ9QVP9 1009 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Vmn2r27D3YUK6 857 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Sat1P48026 171 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tbx1P70323 479 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tex24Q5DP50 351 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ubxn7Q6P5G6 467 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Mab21L3Q8CI17 429 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Dennd1aQ8K382 1016 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Q9CQC3 228 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ccdc77Q9CZH8 489 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 LrgukQ9D5S7 820 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Bcl10Q9Z0H7 233 aa10.5□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Umodl1Q5DID3 1319 aa10.5□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms