RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Srp54P14576 504 aa17.05■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Aqp8P56404 261 aa17.05■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Zscan4fQ3URS2 506 aa17.05■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Klra6Q60653 266 aa17.05■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Zscan4cQ80VJ6 506 aa17.05■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Osbpl3Q9DBS9 855 aa17.05■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Adgra3Q7TT36 1310 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Gm45208A0A140LJ36 292 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Zfp788E9Q980 884 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Ptpn12P35831 775 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Ppm1bP36993 390 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Gpd1lQ3ULJ0 351 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 H2afy2Q8CCK0 372 aaKnown RBP17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Rnf135Q9CWS1 417 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Sptlc1O35704 473 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Mtnd3P03899 115 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Il1rl1P14719 567 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Ass1P16460 412 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Upf3aQ3ULJ3 422 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Foxd1Q61345 456 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 FdxrQ61578 494 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Ugt1a9Q62452 528 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Sec14l2Q99J08 403 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Bcl2l12Q9D3J3 255 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Kctd4Q9D7X1 259 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Abcb10Q9JI39 715 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 XdhQ00519 1335 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 JhyE9Q793 770 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Rab12P35283 243 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Cyp2j11Q3UNV2 504 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 CcnhQ61458 323 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Brd8Q8R3B7 951 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Rxfp2Q91ZZ5 737 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 NwcQ9CQI4 244 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Dcun1d5Q9CXV9 237 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Tmx2Q9D710 295 aaKnown RBP17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Arih1Q9Z1K5 555 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Aldh3a1P47739 453 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 CamkvQ3UHL1 512 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Sytl5Q80T23 753 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Zfp398Q8BV16 643 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Smg8Q8VE18 991 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Uxs1Q91XL3 420 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Tssk3Q9D2E1 268 aa17.04■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Gcnt4E9Q649 455 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Ruvbl2Q9WTM5 463 aaKnown RBP17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Pcdh9F8VPK8 1237 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Il4i1O09046 630 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 PrkcdP28867 674 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Elk3P41971 409 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Siah1aP61092 282 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Pou1f1Q00286 291 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Sh3rf3Q8C120 878 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Ndufa10Q99LC3 355 aaKnown RBP17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Trem1Q9JKE2 230 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 PnkpQ9JLV6 522 aaKnown RBP17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Akirin2B1AXD8 201 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Sec22bO08547 215 aaKnown RBP17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Pih1d3Q3KNI6 218 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Arhgef33Q8BW86 850 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Rasal3Q8C2K5 1041 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Samd3Q8C4H2 520 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Tbc1d14Q8CGA2 694 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Mrpl19Q9D338 292 aaKnown RBP17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Prkar1aQ9DBC7 381 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Serpini2Q9JK88 405 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 InvsO89019 1062 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 PtpreP49446 699 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 CcncQ62447 283 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Fbxw8Q8BIA4 598 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Stau2Q8CJ67 570 aaKnown RBP17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Noxred1Q9D3S5 366 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 GOLGA7BQ9D428 167 aa17.03■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Ms4a14A0A087WSD2 1232 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Magea6O89010 325 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Cyp2b9P12790 491 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Traf2P39429 501 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Itga1Q3V3R4 1179 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Zscan26Q5RJ54 466 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Nudcd1Q6PIP5 582 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Magea3Q6T340 320 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Mcph1Q7TT79 822 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Snapc2Q91XA5 359 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Elp3Q9CZX0 547 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Tubgcp6G5E8P0 1769 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Mindy4b-psA0A1W2P7H6 457 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Gm8926L7MUE8 181 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Kcnu1O54982 1121 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 CcnoP0C242 352 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Rbm20Q3UQS8 1199 aaKnown RBP17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Ipcef1Q5DU31 406 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Chst10Q6PGK7 356 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 3830417A13RikQ8BQJ2 303 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Guf1Q8C3X4 651 aaKnown RBP17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Sv2aQ9JIS5 742 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Tfr2Q9JKX3 798 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Pde1aQ61481 565 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Gadl1Q80WP8 550 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Smim11aQ99J19 55 aa17.02■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Creb3l1Q9Z125 519 aa17.02■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms