RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 PIGNO95427 931 aa18.87■□□□□ 0.61
SCARB2-213ENST00000638680 SCNN1BP51168 640 aa18.87■□□□□ 0.61
SCARB2-213ENST00000638680 PLK1P53350 603 aa18.87■□□□□ 0.61
SCARB2-213ENST00000638680 RHOAP61586 193 aa18.87■□□□□ 0.61
SCARB2-213ENST00000638680 ALFQ53S48 1182 aa18.87■□□□□ 0.61
SCARB2-213ENST00000638680 SCUBE3Q8IX30 993 aa18.87■□□□□ 0.61
SCARB2-213ENST00000638680 FAM126BQ8IXS8 530 aa18.87■□□□□ 0.61
SCARB2-213ENST00000638680 SYTL1Q8IYJ3 562 aa18.87■□□□□ 0.61
SCARB2-213ENST00000638680 GTF2A1LQ9UNN4 478 aa18.87■□□□□ 0.61
SCARB2-213ENST00000638680 CCR1P32246 355 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 MAD2L1Q13257 205 aaPredicted RBP18.86■□□□□ 0.61
SCARB2-213ENST00000638680 KCNT2Q6UVM3 1135 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 LPCAT1Q8NF37 534 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 ITFG1Q8TB96 612 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 DLG3Q92796 817 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 MARK4Q96L34 752 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 FRMPD4Q14CM0 1322 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 EIF2S1P05198 315 aaKnown RBP18.86■□□□□ 0.61
SCARB2-213ENST00000638680 RHOCP08134 193 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 ERVK-10P10266 1014 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 LHX1P48742 406 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 MARC1Q5VT66 337 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 C19orf60Q96EN9 201 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 ZDHHC15Q96MV8 337 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 SERHL2Q9H4I8 314 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 SERHLQ9NQF3 203 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 ETNK2Q9NVF9 386 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 PCYOX1Q9UHG3 505 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 CNTNAP4Q9C0A0 1308 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 VIL1P09327 827 aaKnown RBP18.86■□□□□ 0.61
SCARB2-213ENST00000638680 LRPAP1P30533 357 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 ITGADQ13349 1161 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 RNFT2Q96EX2 444 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 CDHR5Q9HBB8 845 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 SNX8Q9Y5X2 465 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 TRIM43BA6NCK2 446 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 DDTLA6NHG4 134 aaPredicted RBP18.86■□□□□ 0.61
SCARB2-213ENST00000638680 FAM220BPB1ANY3 271 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 CBX4O00257 560 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 THPOP40225 353 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 FBXO47Q5MNV8 452 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 DNAJC14Q6Y2X3 702 aaPredicted RBP18.86■□□□□ 0.61
SCARB2-213ENST00000638680 GLIS3Q8NEA6 775 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 DEPDC7Q96QD5 511 aa18.86■□□□□ 0.61
SCARB2-213ENST00000638680 KCNK1O00180 336 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 SYNCRIPO60506 623 aaKnown RBP18.85■□□□□ 0.61
SCARB2-213ENST00000638680 MBL2P11226 248 aaPredicted RBP18.85■□□□□ 0.61
SCARB2-213ENST00000638680 DLG4P78352 724 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 ZNF614Q8N883 585 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 ASZ1Q8WWH4 475 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 PDCD2LQ9BRP1 358 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 LRMDAQ9H2I8 198 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 KRT6AP02538 564 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 KRT6BP04259 564 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 CHKAP35790 457 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 FEN1P39748 380 aaKnown RBP18.85■□□□□ 0.61
SCARB2-213ENST00000638680 KRT6CP48668 564 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 PDK3Q15120 406 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 VPS28Q9UK41 221 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 SPATA2Q9UM82 520 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 IQCA1LA6NCM1 817 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 SEC22BO75396 215 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 ZMPSTE24O75844 475 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 CALCAP01258 141 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 KDELR1P24390 212 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 FRG1Q14331 258 aaKnown RBP18.85■□□□□ 0.61
SCARB2-213ENST00000638680 LNX1Q8TBB1 728 aaPredicted RBP18.85■□□□□ 0.61
SCARB2-213ENST00000638680 PRRG3Q9BZD7 231 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 SNTG2Q9NY99 539 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 CHKBQ9Y259 395 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 EPHB6O15197 1021 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 BMP6P22004 513 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 CDH8P55286 799 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 EN1Q05925 392 aaPredicted RBP18.85■□□□□ 0.61
SCARB2-213ENST00000638680 STYK1Q6J9G0 422 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 FAM180AQ6UWF9 173 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 VN1R5Q7Z5H4 357 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 ZDHHC17Q8IUH5 632 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 UBASH3BQ8TF42 649 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 ART4Q93070 314 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 TRHDEQ9UKU6 1024 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 CNTNAP2Q9UHC6 1331 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 HACD1B0YJ81 288 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 TISP43B9A030 160 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 ANPEPP15144 967 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 USP39Q53GS9 565 aaKnown RBP18.85■□□□□ 0.61
SCARB2-213ENST00000638680 CYP4Z2PQ8N1L4 340 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 SAMD3Q8N6K7 520 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 OR56A4Q8NGH8 313 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 PRKD2Q9BZL6 878 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 USP32Q8NFA0 1604 aa18.85■□□□□ 0.61
SCARB2-213ENST00000638680 SPATA31A1Q5TZJ5 1347 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 VPS4BO75351 444 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 PRKCIP41743 596 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 ZDHHC13Q8IUH4 622 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 CROCCP3Q8IVE0 287 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 DDX43Q9NXZ2 648 aaKnown RBP18.84■□□□□ 0.61
SCARB2-213ENST00000638680 SH3BP4Q9P0V3 963 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 ACTL7BQ9Y614 415 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 ANKRD63C9JTQ0 380 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms