RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 PCED1AQ9H1Q7 454 aa18.56■□□□□ 0.56
PNKP-225ENST00000636214 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.56■□□□□ 0.56
PNKP-225ENST00000636214 ASNSD1Q9NWL6 643 aa18.56■□□□□ 0.56
PNKP-225ENST00000636214 COX16Q9P0S2 106 aa18.56■□□□□ 0.56
PNKP-225ENST00000636214 CYTH4Q9UIA0 394 aa18.56■□□□□ 0.56
PNKP-225ENST00000636214 DNAJC12Q9UKB3 198 aa18.56■□□□□ 0.56
PNKP-225ENST00000636214 PCDHGC3Q9UN70 934 aa18.56■□□□□ 0.56
PNKP-225ENST00000636214 NUMA1Q14980 2115 aa18.56■□□□□ 0.56
PNKP-225ENST00000636214 KNL1Q8NG31 2342 aa18.55■□□□□ 0.56
PNKP-225ENST00000636214 IGLV3-19P01714 112 aa18.55■□□□□ 0.56
PNKP-225ENST00000636214 TACR2P21452 398 aa18.55■□□□□ 0.56
PNKP-225ENST00000636214 CSKP41240 450 aa18.55■□□□□ 0.56
PNKP-225ENST00000636214 APBA1Q02410 837 aa18.55■□□□□ 0.56
PNKP-225ENST00000636214 RAPGEF1Q13905 1077 aa18.55■□□□□ 0.56
PNKP-225ENST00000636214 PTPRNQ16849 979 aa18.55■□□□□ 0.56
PNKP-225ENST00000636214 LRSAM1Q6UWE0 723 aa18.55■□□□□ 0.56
PNKP-225ENST00000636214 IRF2BP1Q8IU81 584 aa18.55■□□□□ 0.56
PNKP-225ENST00000636214 CFAP52Q8N1V2 620 aa18.55■□□□□ 0.56
PNKP-225ENST00000636214 C1orf131Q8NDD1 294 aaKnown RBP18.55■□□□□ 0.56
PNKP-225ENST00000636214 TTC17Q96AE7 1141 aa18.55■□□□□ 0.56
PNKP-225ENST00000636214 CPXM1Q96SM3 734 aa18.55■□□□□ 0.56
PNKP-225ENST00000636214 TUBGCP2Q9BSJ2 902 aa18.55■□□□□ 0.56
PNKP-225ENST00000636214 BTBD1Q9H0C5 482 aa18.55■□□□□ 0.56
PNKP-225ENST00000636214 NDST4Q9H3R1 872 aa18.55■□□□□ 0.56
PNKP-225ENST00000636214 PRSS16Q9NQE7 514 aa18.55■□□□□ 0.56
PNKP-225ENST00000636214 DDIT4Q9NX09 232 aa18.55■□□□□ 0.56
PNKP-225ENST00000636214 KIAA1522Q9P206 1035 aaPredicted RBP18.55■□□□□ 0.56
PNKP-225ENST00000636214 NCKAP1Q9Y2A7 1128 aa18.55■□□□□ 0.56
PNKP-225ENST00000636214 PCDH15Q96QU1 1955 aa18.54■□□□□ 0.56
PNKP-225ENST00000636214 METTL12A8MUP2 240 aa18.54■□□□□ 0.56
PNKP-225ENST00000636214 UPK3BL1B0FP48 263 aa18.54■□□□□ 0.56
PNKP-225ENST00000636214 UPK3BL2E5RIL1 263 aa18.54■□□□□ 0.56
PNKP-225ENST00000636214 BCAT2O15382 392 aaPredicted RBP18.54■□□□□ 0.56
PNKP-225ENST00000636214 CCR1P32246 355 aa18.54■□□□□ 0.56
PNKP-225ENST00000636214 NNMTP40261 264 aa18.54■□□□□ 0.56
PNKP-225ENST00000636214 MTA1Q13330 715 aa18.54■□□□□ 0.56
PNKP-225ENST00000636214 HNRNPDQ14103 355 aaKnown RBP18.54■□□□□ 0.56
PNKP-225ENST00000636214 ST3GAL2Q16842 350 aa18.54■□□□□ 0.56
PNKP-225ENST00000636214 DPCR1Q3MIW9 517 aa18.54■□□□□ 0.56
PNKP-225ENST00000636214 VWA3BQ502W6 1294 aa18.54■□□□□ 0.56
PNKP-225ENST00000636214 PITRM1Q5JRX3 1037 aa18.54■□□□□ 0.56
PNKP-225ENST00000636214 TTC39BQ5VTQ0 682 aaPredicted RBP18.54■□□□□ 0.56
PNKP-225ENST00000636214 C11orf57Q6ZUT1 292 aaPredicted RBP18.54■□□□□ 0.56
PNKP-225ENST00000636214 DEFB106AQ8N104 65 aa18.54■□□□□ 0.56
PNKP-225ENST00000636214 DNASE2BQ8WZ79 361 aa18.54■□□□□ 0.56
PNKP-225ENST00000636214 SCML1Q9UN30 329 aa18.54■□□□□ 0.56
PNKP-225ENST00000636214 PCDHB9Q9Y5E1 797 aa18.54■□□□□ 0.56
PNKP-225ENST00000636214 MUC22E2RYF6 1773 aaPredicted RBP18.53■□□□□ 0.56
PNKP-225ENST00000636214 KCNU1A8MYU2 1149 aa18.53■□□□□ 0.56
PNKP-225ENST00000636214 GRAP2O75791 330 aa18.53■□□□□ 0.56
PNKP-225ENST00000636214 SEMA4FO95754 770 aa18.53■□□□□ 0.56
PNKP-225ENST00000636214 CER1O95813 267 aa18.53■□□□□ 0.56
PNKP-225ENST00000636214 TPM2P07951 284 aa18.53■□□□□ 0.56
PNKP-225ENST00000636214 SRPRAP08240 638 aaKnown RBP18.53■□□□□ 0.56
PNKP-225ENST00000636214 OXCT1P55809 520 aa18.53■□□□□ 0.56
PNKP-225ENST00000636214 GRIK2Q13002 908 aa18.53■□□□□ 0.56
PNKP-225ENST00000636214 SEMA3BQ13214 749 aa18.53■□□□□ 0.56
PNKP-225ENST00000636214 SLC14A1Q13336 389 aa18.53■□□□□ 0.56
PNKP-225ENST00000636214 HSP90AA4PQ58FG1 418 aa18.53■□□□□ 0.56
PNKP-225ENST00000636214 IL27RAQ6UWB1 636 aa18.53■□□□□ 0.56
PNKP-225ENST00000636214 PPP1R9BQ96SB3 815 aa18.53■□□□□ 0.56
PNKP-225ENST00000636214 DNAAF2Q9NVR5 837 aaKnown RBP18.53■□□□□ 0.56
PNKP-225ENST00000636214 EIF2B4Q9UI10 523 aaKnown RBP18.53■□□□□ 0.56
PNKP-225ENST00000636214 XPO7Q9UIA9 1087 aaKnown RBP18.53■□□□□ 0.56
PNKP-225ENST00000636214 FOXN3O00409 490 aaPredicted RBP18.52■□□□□ 0.56
PNKP-225ENST00000636214 IGLV3-25P01717 112 aa18.52■□□□□ 0.56
PNKP-225ENST00000636214 RPS14P62263 151 aaKnown RBP18.52■□□□□ 0.56
PNKP-225ENST00000636214 SIM1P81133 766 aaPredicted RBP18.52■□□□□ 0.56
PNKP-225ENST00000636214 ECT2LQ008S8 904 aa18.52■□□□□ 0.56
PNKP-225ENST00000636214 NME3Q13232 169 aa18.52■□□□□ 0.56
PNKP-225ENST00000636214 SLC12A1Q13621 1099 aa18.52■□□□□ 0.56
PNKP-225ENST00000636214 KCNJ12Q14500 433 aa18.52■□□□□ 0.56
PNKP-225ENST00000636214 TAF5Q15542 800 aa18.52■□□□□ 0.56
PNKP-225ENST00000636214 TEAD4Q15561 434 aa18.52■□□□□ 0.56
PNKP-225ENST00000636214 HNRNPA1L2Q32P51 320 aaKnown RBP18.52■□□□□ 0.56
PNKP-225ENST00000636214 FAM183BPQ6ZVS7 135 aa18.52■□□□□ 0.56
PNKP-225ENST00000636214 SLC47A2Q86VL8 602 aa18.52■□□□□ 0.56
PNKP-225ENST00000636214 KDM1BQ8NB78 822 aa18.52■□□□□ 0.56
PNKP-225ENST00000636214 TMEM35BQ8NCS4 154 aa18.52■□□□□ 0.56
PNKP-225ENST00000636214 MSANTD4Q8NCY6 345 aa18.52■□□□□ 0.56
PNKP-225ENST00000636214 OR2I1PQ8NGU4 316 aa18.52■□□□□ 0.56
PNKP-225ENST00000636214 SLC2A13Q96QE2 648 aa18.52■□□□□ 0.56
PNKP-225ENST00000636214 SGK2Q9HBY8 427 aa18.52■□□□□ 0.56
PNKP-225ENST00000636214 ERVW-1Q9UQF0 538 aa18.52■□□□□ 0.56
PNKP-225ENST00000636214 EDDM13A0A1B0GTR0 161 aa18.51■□□□□ 0.55
PNKP-225ENST00000636214 A0A1B0GVM2 712 aa18.51■□□□□ 0.55
PNKP-225ENST00000636214 TCAF2A6NFQ2 919 aa18.51■□□□□ 0.55
PNKP-225ENST00000636214 DAB1O75553 588 aa18.51■□□□□ 0.55
PNKP-225ENST00000636214 FSBPO95073 299 aa18.51■□□□□ 0.55
PNKP-225ENST00000636214 ACSL1P33121 698 aa18.51■□□□□ 0.55
PNKP-225ENST00000636214 SLC6A3Q01959 620 aa18.51■□□□□ 0.55
PNKP-225ENST00000636214 SULT2A1Q06520 285 aa18.51■□□□□ 0.55
PNKP-225ENST00000636214 CT47A1Q5JQC4 288 aaPredicted RBP18.51■□□□□ 0.55
PNKP-225ENST00000636214 MMS22LQ6ZRQ5 1243 aa18.51■□□□□ 0.55
PNKP-225ENST00000636214 SND1Q7KZF4 910 aaKnown RBP eCLIP18.51■□□□□ 0.55
PNKP-225ENST00000636214 PIP4P1Q86T03 277 aa18.51■□□□□ 0.55
PNKP-225ENST00000636214 ZDHHC17Q8IUH5 632 aa18.51■□□□□ 0.55
PNKP-225ENST00000636214 DHX40Q8IX18 779 aaKnown RBP18.51■□□□□ 0.55
PNKP-225ENST00000636214 MYEOVQ96EZ4 313 aa18.51■□□□□ 0.55
PNKP-225ENST00000636214 RPRD1AQ96P16 312 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms