RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 TBC1D1Q86TI0 1168 aaPredicted RBP3.61□□□□□ -1.83
VPS8-228ENST00000628962 PELI3Q8N2H9 469 aa3.61□□□□□ -1.83
VPS8-228ENST00000628962 C1orf131Q8NDD1 294 aaKnown RBP3.61□□□□□ -1.83
VPS8-228ENST00000628962 SPPL3Q8TCT6 385 aa3.61□□□□□ -1.83
VPS8-228ENST00000628962 AFG1LQ8WV93 481 aa3.61□□□□□ -1.83
VPS8-228ENST00000628962 RAPGEF4Q8WZA2 1011 aa3.61□□□□□ -1.83
VPS8-228ENST00000628962 R3HDM4Q96D70 268 aa3.61□□□□□ -1.83
VPS8-228ENST00000628962 EID2BQ96D98 161 aa3.61□□□□□ -1.83
VPS8-228ENST00000628962 ZBTB10Q96DT7 871 aa3.61□□□□□ -1.83
VPS8-228ENST00000628962 SLC46A1Q96NT5 459 aa3.61□□□□□ -1.83
VPS8-228ENST00000628962 GDF15Q99988 308 aa3.61□□□□□ -1.83
VPS8-228ENST00000628962 PTDSS2Q9BVG9 487 aa3.61□□□□□ -1.83
VPS8-228ENST00000628962 CIPCQ9C0C6 399 aa3.61□□□□□ -1.83
VPS8-228ENST00000628962 OSBPL5Q9H0X9 879 aaPredicted RBP3.61□□□□□ -1.83
VPS8-228ENST00000628962 PCDHAC1Q9H158 963 aa3.61□□□□□ -1.83
VPS8-228ENST00000628962 DHX36Q9H2U1 1008 aaKnown RBP3.61□□□□□ -1.83
VPS8-228ENST00000628962 TMEM8AQ9HCN3 771 aa3.61□□□□□ -1.83
VPS8-228ENST00000628962 BLOC1S4Q9NUP1 217 aa3.61□□□□□ -1.83
VPS8-228ENST00000628962 TXLNGQ9NUQ3 528 aa3.61□□□□□ -1.83
VPS8-228ENST00000628962 IRAK4Q9NWZ3 460 aa3.61□□□□□ -1.83
VPS8-228ENST00000628962 ZSCAN32Q9NX65 697 aa3.61□□□□□ -1.83
VPS8-228ENST00000628962 HEY2Q9UBP5 337 aa3.61□□□□□ -1.83
VPS8-228ENST00000628962 SRP68Q9UHB9 627 aaKnown RBP3.61□□□□□ -1.83
VPS8-228ENST00000628962 POLG2Q9UHN1 485 aa3.61□□□□□ -1.83
VPS8-228ENST00000628962 HERC5Q9UII4 1024 aaKnown RBP3.61□□□□□ -1.83
VPS8-228ENST00000628962 WRNQ14191 1432 aaPredicted RBP eCLIP3.61□□□□□ -1.83
VPS8-228ENST00000628962 LOC102723971A0A1B0GUV8 181 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 C4orf47A7E2U8 309 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 B4DGG1 531 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 HOXC11O43248 304 aaPredicted RBP3.6□□□□□ -1.83
VPS8-228ENST00000628962 ACTL6BO94805 426 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 TBX18O95935 607 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 ATXN1LP0C7T5 689 aaKnown RBP3.6□□□□□ -1.83
VPS8-228ENST00000628962 XRCC6P12956 609 aaKnown RBP eCLIP3.6□□□□□ -1.83
VPS8-228ENST00000628962 NPPBP16860 134 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 TPH1P17752 444 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 EGR1P18146 543 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 CST5P28325 142 aaPredicted RBP3.6□□□□□ -1.83
VPS8-228ENST00000628962 THBS4P35443 961 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 ADD2P35612 726 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 LOXL3P58215 753 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 PRKG2Q13237 762 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 FHL3Q13643 280 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 RNASE12Q5GAN4 147 aaKnown RBP3.6□□□□□ -1.83
VPS8-228ENST00000628962 CCDC30Q5VVM6 783 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 TTLL5Q6EMB2 1281 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 CRTC1Q6UUV9 634 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 DSTYKQ6XUX3 929 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 USP49Q70CQ1 688 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 KRT28Q7Z3Y7 464 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 PIM3Q86V86 326 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 DCP1BQ8IZD4 617 aaKnown RBP3.6□□□□□ -1.83
VPS8-228ENST00000628962 FAM9BQ8IZU0 186 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 ZNF548Q8NEK5 533 aaPredicted RBP3.6□□□□□ -1.83
VPS8-228ENST00000628962 FAM46DQ8NEK8 389 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 OTUD7AQ8TE49 926 aaPredicted RBP3.6□□□□□ -1.83
VPS8-228ENST00000628962 ADAMTS18Q8TE60 1221 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 UCMAQ8WVF2 138 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 SNRNP27Q8WVK2 155 aaKnown RBP3.6□□□□□ -1.83
VPS8-228ENST00000628962 XAGE5Q8WWM1 108 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 THAP4Q8WY91 577 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 RILPL2Q969X0 211 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 MAELQ96JY0 434 aaKnown RBP3.6□□□□□ -1.83
VPS8-228ENST00000628962 PPP1R9BQ96SB3 815 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 FAM234AQ9H0X4 552 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 SLCO5A1Q9H2Y9 848 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 MLXIPQ9HAP2 919 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 TBC1D22BQ9NU19 505 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 FEM1BQ9UK73 627 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 PTPRKQ15262 1439 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 AKNAQ7Z591 1439 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 TRAPPC8Q9Y2L5 1435 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 DISP1Q96F81 1524 aa3.6□□□□□ -1.83
VPS8-228ENST00000628962 A0A087WZ62 844 aa3.59□□□□□ -1.83
VPS8-228ENST00000628962 B4E171 279 aa3.59□□□□□ -1.83
VPS8-228ENST00000628962 B9A039 149 aa3.59□□□□□ -1.83
VPS8-228ENST00000628962 TMEM232C9JQI7 657 aa3.59□□□□□ -1.83
VPS8-228ENST00000628962 CNOT3O75175 753 aaKnown RBP3.59□□□□□ -1.83
VPS8-228ENST00000628962 DLDP09622 509 aaKnown RBP3.59□□□□□ -1.83
VPS8-228ENST00000628962 T-ENOLP0DO92 83 aa3.59□□□□□ -1.83
VPS8-228ENST00000628962 CYP19A1P11511 503 aaPredicted RBP3.59□□□□□ -1.83
VPS8-228ENST00000628962 ATP1A3P13637 1013 aa3.59□□□□□ -1.83
VPS8-228ENST00000628962 BTF3P20290 206 aaKnown RBP3.59□□□□□ -1.83
VPS8-228ENST00000628962 FPR3P25089 353 aa3.59□□□□□ -1.83
VPS8-228ENST00000628962 YY1P25490 414 aa3.59□□□□□ -1.83
VPS8-228ENST00000628962 TSPAN7P41732 249 aa3.59□□□□□ -1.83
VPS8-228ENST00000628962 CDKN2AP42771 156 aaKnown RBP3.59□□□□□ -1.83
VPS8-228ENST00000628962 ME1P48163 572 aa3.59□□□□□ -1.83
VPS8-228ENST00000628962 AARSP49588 968 aaKnown RBP eCLIP3.59□□□□□ -1.83
VPS8-228ENST00000628962 CPT1AP50416 773 aa3.59□□□□□ -1.83
VPS8-228ENST00000628962 PRKAA2P54646 552 aa3.59□□□□□ -1.83
VPS8-228ENST00000628962 ALDH18A1P54886 795 aaKnown RBP3.59□□□□□ -1.83
VPS8-228ENST00000628962 AP2B1P63010 937 aa3.59□□□□□ -1.83
VPS8-228ENST00000628962 SATB1Q01826 763 aa3.59□□□□□ -1.83
VPS8-228ENST00000628962 NUCB1Q02818 461 aa3.59□□□□□ -1.83
VPS8-228ENST00000628962 TLE2Q04725 743 aa3.59□□□□□ -1.83
VPS8-228ENST00000628962 UBE3AQ05086 875 aa3.59□□□□□ -1.83
VPS8-228ENST00000628962 ZNF91Q05481 1191 aa3.59□□□□□ -1.83
VPS8-228ENST00000628962 NSUN2Q08J23 767 aaKnown RBP eCLIP3.59□□□□□ -1.83
VPS8-228ENST00000628962 SLC12A1Q13621 1099 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms