RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 TUBP50607 506 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 ST8SIA6P61647 398 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 ZNF252P-AS1Q0IIN9 211 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 PPP1R21Q6ZMI0 780 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 OTUD6BQ8N6M0 293 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 LEMD2Q8NC56 503 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 SMG9Q9H0W8 520 aaKnown RBP12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 RASSF4Q9H2L5 321 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 SAMD15Q9P1V8 674 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 RIPK2O43353 540 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 GRIN2CQ14957 1233 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 ERMARDQ5T6L9 678 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 CCDC91Q7Z6B0 441 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 TMEM110Q86TL2 294 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 RAPGEF5Q92565 580 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 OSBPL8Q9BZF1 889 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 PRKD2Q9BZL6 878 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 CYLDQ9NQC7 956 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 GGA2Q9UJY4 613 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 SDK1Q7Z5N4 2213 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 SCN1AP35498 2009 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 SCN5AQ14524 2016 aa12.83□□□□□ -0.36
SYNGAP1-207ENST00000628646 F5P12259 2224 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 CST8O60676 142 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 TAS2R40P59535 323 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 SPRED3Q2MJR0 410 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 SYPL2Q5VXT5 272 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 PLEKHA7Q6IQ23 1121 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 YTHDF3Q7Z739 585 aaKnown RBP12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 PCGF5Q86SE9 256 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 TAC4Q86UU9 113 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 SNF8Q96H20 258 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 FAM118BQ9BPY3 351 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 F5H423 210 aaPredicted RBP12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 RASGRF2O14827 1237 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 CORO1AP31146 461 aaKnown RBP12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 MTHFRP42898 656 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 PPP3CCP48454 512 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 CACNA2D1P54289 1103 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 SLC25A52Q3SY17 297 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 PDCD6IPQ8WUM4 868 aaKnown RBP12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 ZNF317Q96PQ6 595 aaPredicted RBP12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 OR12D3Q9UGF7 316 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 CHKAP35790 457 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 USP46P62068 366 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 IFI35P80217 286 aaPredicted RBP12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 KCTD13Q8WZ19 329 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 KLHL8Q9P2G9 620 aaPredicted RBP12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 KRT10P13645 584 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 PPP2R5DQ14738 602 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 SH3RF2Q8TEC5 729 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 CENPTQ96BT3 561 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 RTP3Q9BQQ7 232 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 VPS28Q9UK41 221 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 SCML2Q9UQR0 700 aa12.82□□□□□ -0.36
SYNGAP1-207ENST00000628646 RHOCP08134 193 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 ZFXP17010 805 aaPredicted RBP12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 HOXB8P17481 243 aaPredicted RBP12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 TRIP13Q15645 432 aaPredicted RBP12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 CCDC121Q6ZUS5 278 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 TRMT10CQ7L0Y3 403 aaKnown RBP12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 OTOP3Q7RTS5 596 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 ADGRD2Q7Z7M1 963 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 NAT16Q8N8M0 369 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 MDM1Q8TC05 714 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 USP33Q8TEY7 942 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 C1orf54Q8WWF1 131 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 ATG4AQ8WYN0 398 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 BBS2Q9BXC9 721 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 TMEM191CA6NGB0 347 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 TCF4P15884 667 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 VCPP55072 806 aaKnown RBP12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 COPS2P61201 443 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 PPARDQ03181 441 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 ARHGEF18Q6ZSZ5 1173 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 ATPAF2Q8N5M1 289 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 TDRD5Q8NAT2 981 aaKnown RBP12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 EXD1Q8NHP7 514 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 PNPLA8Q9NP80 782 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 ENDOD1O94919 500 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 SLC4A1P02730 911 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 OR1E1P30953 314 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 PTK6Q13882 451 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 ZNF235Q14590 738 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 LGSNQ5TDP6 509 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 PGBD3Q8N328 593 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 ZSCAN18Q8TBC5 510 aaPredicted RBP12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 CELF6Q96J87 481 aaKnown RBP12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 XPO6Q96QU8 1125 aaKnown RBP12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 TASP1Q9H6P5 420 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 FBXW11Q9UKB1 542 aa12.81□□□□□ -0.36
SYNGAP1-207ENST00000628646 SARNPP82979 210 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 ATP13A4Q4VNC1 1196 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 PPP1R15BQ5SWA1 713 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 ARID3BQ8IVW6 561 aaPredicted RBP12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 MFN1Q8IWA4 741 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 CFAP52Q8N1V2 620 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 WDTC1Q8N5D0 677 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 PSMG2Q969U7 264 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 FCRL2Q96LA5 508 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms