RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 SNIP1Q8TAD8 396 aaKnown RBP15.26■□□□□ 0.03
PNKP-218ENST00000625299 SEMA4DQ92854 862 aa15.26■□□□□ 0.03
PNKP-218ENST00000625299 FGF11Q92914 225 aa15.26■□□□□ 0.03
PNKP-218ENST00000625299 PAGE5Q96GU1 130 aa15.26■□□□□ 0.03
PNKP-218ENST00000625299 TMEM8AQ9HCN3 771 aa15.26■□□□□ 0.03
PNKP-218ENST00000625299 TSPAN16Q9UKR8 245 aa15.26■□□□□ 0.03
PNKP-218ENST00000625299 PCDHA7Q9UN72 937 aa15.26■□□□□ 0.03
PNKP-218ENST00000625299 NYNRINQ9P2P1 1898 aaKnown RBP15.26■□□□□ 0.03
PNKP-218ENST00000625299 TEX51A0A1B0GUA7 166 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 A0A1W2PR77 199 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 XPO1O14980 1071 aaKnown RBP15.25■□□□□ 0.03
PNKP-218ENST00000625299 MAPK13O15264 365 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 LCP1P13796 627 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 SLC6A4P31645 630 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 SLC8A1P32418 973 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 ACTN2P35609 894 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 CSKP41240 450 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 NXPH1P58417 271 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 CFHR1Q03591 330 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 KCNJ12Q14500 433 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 HNRNPA1L2Q32P51 320 aaKnown RBP15.25■□□□□ 0.03
PNKP-218ENST00000625299 SLC45A4Q5BKX6 768 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 PIK3R6Q5UE93 754 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 KRT39Q6A163 491 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 CARNMT1Q8N4J0 409 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 TTC39CQ8N584 583 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 LSM14AQ8ND56 463 aaKnown RBP15.25■□□□□ 0.03
PNKP-218ENST00000625299 OR14C36Q8NHC7 312 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 UBA3Q8TBC4 463 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 TSC1Q92574 1164 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 MYO19Q96H55 970 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 NAF1Q96HR8 494 aaKnown RBP15.25■□□□□ 0.03
PNKP-218ENST00000625299 ABCC13Q9NSE7 274 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 HESX1Q9UBX0 185 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 CLCA2Q9UQC9 943 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 MAPK8IP1Q9UQF2 711 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 TRAF3IP3Q9Y228 551 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 CEP83Q9Y592 693 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 CFAP46Q8IYW2 2715 aa15.25■□□□□ 0.03
PNKP-218ENST00000625299 TENM4Q6N022 2769 aa15.24■□□□□ 0.03
PNKP-218ENST00000625299 TYW5A2RUC4 315 aaKnown RBP15.24■□□□□ 0.03
PNKP-218ENST00000625299 TTC34A8MYJ7 566 aa15.24■□□□□ 0.03
PNKP-218ENST00000625299 TLR4O00206 839 aa15.24■□□□□ 0.03
PNKP-218ENST00000625299 ACTN4O43707 911 aaKnown RBP15.24■□□□□ 0.03
PNKP-218ENST00000625299 CD19P15391 556 aa15.24■□□□□ 0.03
PNKP-218ENST00000625299 SLC11A2P49281 568 aa15.24■□□□□ 0.03
PNKP-218ENST00000625299 MXI1P50539 228 aa15.24■□□□□ 0.03
PNKP-218ENST00000625299 TLE3Q04726 772 aa15.24■□□□□ 0.03
PNKP-218ENST00000625299 BST2Q10589 180 aaKnown RBP15.24■□□□□ 0.03
PNKP-218ENST00000625299 CDH18Q13634 790 aa15.24■□□□□ 0.03
PNKP-218ENST00000625299 TAF1BQ53T94 588 aaPredicted RBP15.24■□□□□ 0.03
PNKP-218ENST00000625299 KDM7AQ6ZMT4 941 aa15.24■□□□□ 0.03
PNKP-218ENST00000625299 CCDC117Q8IWD4 279 aaPredicted RBP15.24■□□□□ 0.03
PNKP-218ENST00000625299 SPACA3Q8IXA5 215 aa15.24■□□□□ 0.03
PNKP-218ENST00000625299 ZNF557Q8N988 423 aaPredicted RBP15.24■□□□□ 0.03
PNKP-218ENST00000625299 HJURPQ8NCD3 748 aaPredicted RBP15.24■□□□□ 0.03
PNKP-218ENST00000625299 LGMNQ99538 433 aa15.24■□□□□ 0.03
PNKP-218ENST00000625299 FZD4Q9ULV1 537 aa15.24■□□□□ 0.03
PNKP-218ENST00000625299 MGAQ8IWI9 3026 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 TBC1D3DA0A087WVF3 549 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 TBC1D3IA0A087WXS9 549 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 TBC1D3EA0A087X179 549 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 TBC1D3KA0A087X1G2 549 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 TBC1D3FA6NER0 549 aaPredicted RBP15.23■□□□□ 0.03
PNKP-218ENST00000625299 TBC1D3LB9A6J9 549 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 PIK3R2O00459 728 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 ACSL4O60488 711 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 SDC3O75056 442 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 ASLP04424 464 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 TBC1D3HP0C7X1 549 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 CKMT2P17540 419 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 PSMC2P35998 433 aaKnown RBP15.23■□□□□ 0.03
PNKP-218ENST00000625299 CTSOP43234 321 aaPredicted RBP15.23■□□□□ 0.03
PNKP-218ENST00000625299 NUMBP49757 651 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 CCR5P51681 352 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 ADPRHP54922 357 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 PPP2CBP62714 309 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 RPS24P62847 133 aaKnown RBP15.23■□□□□ 0.03
PNKP-218ENST00000625299 PPP2CAP67775 309 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 ILKQ13418 452 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 TBC1D25Q3MII6 688 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 SGO2Q562F6 1265 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 FAM133BQ5BKY9 247 aaKnown RBP15.23■□□□□ 0.03
PNKP-218ENST00000625299 MPP7Q5T2T1 576 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 C9orf64Q5T6V5 341 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 TBC1D3GQ6DHY5 549 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 TBC1D3CQ6IPX1 549 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 MMS22LQ6ZRQ5 1243 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 SND1Q7KZF4 910 aaKnown RBP eCLIP15.23■□□□□ 0.03
PNKP-218ENST00000625299 TBC1D3Q8IZP1 549 aaPredicted RBP15.23■□□□□ 0.03
PNKP-218ENST00000625299 OXR1Q8N573 874 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 AADATQ8N5Z0 425 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 TTC17Q96AE7 1141 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 MRGPRX3Q96LB0 322 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 PRICKLE1Q96MT3 831 aaPredicted RBP15.23■□□□□ 0.03
PNKP-218ENST00000625299 RAB20Q9NX57 234 aa15.23■□□□□ 0.03
PNKP-218ENST00000625299 INTS6Q9UL03 887 aaKnown RBP15.23■□□□□ 0.03
PNKP-218ENST00000625299 ARID1BQ8NFD5 2236 aaPredicted RBP15.23■□□□□ 0.03
PNKP-218ENST00000625299 J3QKU1 62 aa15.22■□□□□ 0.03
PNKP-218ENST00000625299 IRAK2O43187 625 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms