RNA–Protein interactions for RNA: ENST00000622098.4

CDK16-223, Transcript of cyclin dependent kinase 16, human

TSL 2 BASIC

Gene CDK16, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-223	ENST00000622098	LOC100653049	A0A140TA62	436 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	ASB14	A6NK59	587 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	FKBP6	O75344	327 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	KRT34	O76011	436 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	POLB	P06746	335 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	GNAT1	P11488	350 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	HOXA11	P31270	313 aa	Predicted RBP	18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	GNL1	P36915	607 aa	Predicted RBP	18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	MATK	P42679	507 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	ABCE1	P61221	599 aa	Known RBP	18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	PEX6	Q13608	980 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	GSTA3	Q16772	222 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	LRRC36	Q1X8D7	754 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	DCAF4L1	Q3SXM0	396 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	FOXB2	Q5VYV0	432 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	PDPK2P	Q6A1A2	396 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	TP53INP2	Q8IXH6	220 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	ZNF567	Q8N184	647 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	LRRC52	Q8N7C0	313 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	KBTBD7	Q8WVZ9	684 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	PRDM12	Q9H4Q4	367 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	PLEKHA5	Q9HAU0	1116 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	DDX43	Q9NXZ2	648 aa	Known RBP	18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	PLXNA1	Q9UIW2	1896 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	CRABP2	P29373	138 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	C9orf57	Q5W0N0	161 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	ERO1B	Q86YB8	467 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	RNF139	Q8WU17	664 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	CERS2	Q96G23	380 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	AGAP3	Q96P47	875 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	S100A14	Q9HCY8	104 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	PAPOLB	Q9NRJ5	636 aa	Known RBP	18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	SNX15	Q9NRS6	342 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	KCNK1	O00180	336 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	AHCYL1	O43865	530 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	USP12	O75317	370 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	GP5	P40197	560 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	IREB2	P48200	963 aa	Known RBP	18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	ZBTB6	Q15916	424 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	MARCH8	Q5T0T0	291 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	TAPT1	Q6NXT6	567 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	SLC30A9	Q6PML9	568 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	GPC2	Q8N158	579 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	PPTC7	Q8NI37	304 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	SLC26A7	Q8TE54	656 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	FERMT1	Q9BQL6	677 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	NAT9	Q9BTE0	207 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	OXCT2	Q9BYC2	517 aa	Predicted RBP	18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	MROH8	Q9H579	483 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	DNAJC28	Q9NX36	388 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	OTOF	Q9HC10	1997 aa		18.19	■□□□□ 0.5
CDK16-223	ENST00000622098	LYN	P07948	512 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	CPA3	P15088	417 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	ADCYAP1R1	P41586	468 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	ADIG	Q0VDE8	80 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	IFRD2	Q12894	506 aa	Predicted RBP	18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	GRIK4	Q16099	956 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	SLC25A52	Q3SY17	297 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	PID1	Q7Z2X4	250 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	HIPK4	Q8NE63	616 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	FCRL3	Q96P31	734 aa	Predicted RBP	18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	NR1H4	Q96RI1	486 aa	Predicted RBP	18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	NXF3	Q9H4D5	531 aa	Known RBP	18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	DERA	Q9Y315	318 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	ZNF195	O14628	629 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	MX2	P20592	715 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	AKAP5	P24588	427 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	SCNN1A	P37088	669 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	USP4	Q13107	963 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	NAB1	Q13506	487 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	INSC	Q1MX18	579 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	FBXO47	Q5MNV8	452 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	SULF1	Q8IWU6	871 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	PHTF2	Q8N3S3	785 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	DCLK2	Q8N568	766 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	OR52K1	Q8NGK4	314 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	FAM49A	Q9H0Q0	323 aa	Predicted RBP	18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	MAN1C1	Q9NR34	630 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	SPTLC1	O15269	473 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	BUD23	O43709	281 aa	Known RBP	18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	ZMPSTE24	O75844	475 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	GARS	P41250	739 aa	Known RBP	18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	ACADSB	P45954	432 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	GLUD2	P49448	558 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	ASPH	Q12797	758 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	PDK1	Q15118	436 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	SLC27A1	Q6PCB7	646 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	MAMDC4	Q6UXC1	1216 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	CATSPER4	Q7RTX7	472 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	DHDDS	Q86SQ9	333 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	PLD6	Q8N2A8	252 aa	Known RBP	18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	EFCAB3	Q8N7B9	438 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	AZIN2	Q96A70	460 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	SNX25	Q9H3E2	840 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	RCOR3	Q9P2K3	495 aa	Predicted RBP	18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	CDH22	Q9UJ99	828 aa		18.18	■□□□□ 0.5
CDK16-223	ENST00000622098	CXCL11	O14625	94 aa		18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	DCX	O43602	365 aa		18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	TKT	P29401	623 aa	Known RBP	18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	ABCG1	P45844	678 aa		18.17	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms