RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 MCUQ8NE86 351 aa16.18■□□□□ 0.18
NPHP4-211ENST00000622020 RTP4Q96DX8 246 aa16.18■□□□□ 0.18
NPHP4-211ENST00000622020 CMTM5Q96DZ9 223 aa16.18■□□□□ 0.18
NPHP4-211ENST00000622020 DMAP1Q9NPF5 467 aaPredicted RBP16.18■□□□□ 0.18
NPHP4-211ENST00000622020 HESX1Q9UBX0 185 aa16.18■□□□□ 0.18
NPHP4-211ENST00000622020 ATP9BO43861 1147 aa16.18■□□□□ 0.18
NPHP4-211ENST00000622020 LTFP02788 710 aa16.18■□□□□ 0.18
NPHP4-211ENST00000622020 RABGGTBP53611 331 aa16.18■□□□□ 0.18
NPHP4-211ENST00000622020 OAZ1P54368 228 aa16.18■□□□□ 0.18
NPHP4-211ENST00000622020 TMEM62Q0P6H9 643 aa16.18■□□□□ 0.18
NPHP4-211ENST00000622020 TLR1Q15399 786 aa16.18■□□□□ 0.18
NPHP4-211ENST00000622020 LCLAT1Q6UWP7 414 aa16.18■□□□□ 0.18
NPHP4-211ENST00000622020 FBXW8Q8N3Y1 598 aa16.18■□□□□ 0.18
NPHP4-211ENST00000622020 DCLK2Q8N568 766 aa16.18■□□□□ 0.18
NPHP4-211ENST00000622020 OR52K1Q8NGK4 314 aa16.18■□□□□ 0.18
NPHP4-211ENST00000622020 LRRC39Q96DD0 335 aa16.18■□□□□ 0.18
NPHP4-211ENST00000622020 GPR20Q99678 358 aa16.18■□□□□ 0.18
NPHP4-211ENST00000622020 SSX2IPQ9Y2D8 614 aa16.18■□□□□ 0.18
NPHP4-211ENST00000622020 FER1L6Q2WGJ9 1857 aa16.18■□□□□ 0.18
NPHP4-211ENST00000622020 C15orf38-AP3S2A0A0A6YYH1 394 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 RNF103O00237 685 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 P4HA1P13674 534 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 PMLP29590 882 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 ARPINQ7Z6K5 226 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 SPATA6LQ8N4H0 392 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 ARNTL2Q8WYA1 636 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 MPP4Q96JB8 637 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 CDRT15Q96T59 188 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 FRMD8Q9BZ67 464 aaPredicted RBP16.17■□□□□ 0.18
NPHP4-211ENST00000622020 C2orf40Q9H1Z8 148 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 COPS7BQ9H9Q2 264 aaPredicted RBP16.17■□□□□ 0.18
NPHP4-211ENST00000622020 PDGFCQ9NRA1 345 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 SNX15Q9NRS6 342 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 GGA3Q9NZ52 723 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 UBP1Q9NZI7 540 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 FIS1Q9Y3D6 152 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 DTNAQ9Y4J8 743 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 NME7Q9Y5B8 376 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 MFSD11O43934 449 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 CCNT2O60583 730 aaKnown RBP16.17■□□□□ 0.18
NPHP4-211ENST00000622020 GCATO75600 419 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 ENO3P13929 434 aaPredicted RBP16.17■□□□□ 0.18
NPHP4-211ENST00000622020 TPH1P17752 444 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 NELFEP18615 380 aaKnown RBP16.17■□□□□ 0.18
NPHP4-211ENST00000622020 ALDH1A3P47895 512 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 EN1Q05925 392 aaPredicted RBP16.17■□□□□ 0.18
NPHP4-211ENST00000622020 HSP90AA5PQ58FG0 334 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 NCBP2-AS2Q69YL0 99 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 PID1Q7Z2X4 250 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 SULF1Q8IWU6 871 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.17■□□□□ 0.18
NPHP4-211ENST00000622020 CXorf38Q8TB03 319 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 ACTRT2Q8TDY3 377 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 NAT14Q8WUY8 206 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 FCRL3Q96P31 734 aaPredicted RBP16.17■□□□□ 0.18
NPHP4-211ENST00000622020 DCDC2Q9UHG0 476 aa16.17■□□□□ 0.18
NPHP4-211ENST00000622020 ARF4P18085 180 aaPredicted RBP16.16■□□□□ 0.18
NPHP4-211ENST00000622020 KLF10Q13118 480 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 PDCD2Q16342 344 aaPredicted RBP16.16■□□□□ 0.18
NPHP4-211ENST00000622020 FAM219BQ5XKK7 198 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 DCAF15Q66K64 600 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 PGM2L1Q6PCE3 622 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 AAGABQ6PD74 315 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 ARHGAP22Q7Z5H3 698 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 STRA8Q7Z7C7 330 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 SESTD1Q86VW0 696 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 SNX32Q86XE0 403 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 DNAAF3Q8N9W5 541 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 DNERQ8NFT8 737 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 ZNF669Q96BR6 464 aaPredicted RBP16.16■□□□□ 0.18
NPHP4-211ENST00000622020 ZNF670Q9BS34 389 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 GRIP2Q9C0E4 1043 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 MTMR10Q9NXD2 777 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 H3BNX3 289 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 ZNF195O14628 629 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 IL18RAPO95256 599 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 MPSTP25325 297 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 AVPR1AP37288 418 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 DRAXINQ8NBI3 349 aaPredicted RBP16.16■□□□□ 0.18
NPHP4-211ENST00000622020 P2RY11Q96G91 374 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 PHF12Q96QT6 1004 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 TBCBQ99426 244 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 NUF2Q9BZD4 464 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 VCX3BQ9H321 246 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 VCX3AQ9NNX9 186 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 UBAP1Q9NZ09 502 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 ARHGAP26Q9UNA1 814 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 TNFSF13BQ9Y275 285 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 SF3B1O75533 1304 aaKnown RBP eCLIP16.16■□□□□ 0.188e-6■■■■■ 107
NPHP4-211ENST00000622020 BPTFQ12830 3046 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.16■□□□□ 0.18
NPHP4-211ENST00000622020 NME3Q13232 169 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 CNGA3Q16281 694 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 RBM44Q6ZP01 1051 aaKnown RBP16.16■□□□□ 0.18
NPHP4-211ENST00000622020 TMC7Q7Z402 723 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 MFSD3Q96ES6 412 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 MKS1Q9NXB0 559 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 ITGA11Q9UKX5 1188 aa16.16■□□□□ 0.18
NPHP4-211ENST00000622020 RGPD3A6NKT7 1758 aaPredicted RBP16.15■□□□□ 0.18
NPHP4-211ENST00000622020 RGPD4Q7Z3J3 1758 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms