RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 E9PAM4 449 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 NCAM2O15394 837 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 CNTN5O94779 1100 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 APODP05090 189 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 MIPP30301 263 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 CD70P32970 193 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 SEMA3BQ13214 749 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 LRRC32Q14392 662 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 FBXO43Q4G163 708 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 EMC10Q5UCC4 262 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 SLFN11Q7Z7L1 901 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 MFN1Q8IWA4 741 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 MAML2Q8IZL2 1156 aaPredicted RBP14.77□□□□□ -0.04
CBWD3-217ENST00000621474 CCAR2Q8N163 923 aaKnown RBP14.77□□□□□ -0.04
CBWD3-217ENST00000621474 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.77□□□□□ -0.04
CBWD3-217ENST00000621474 FIBINQ8TAL6 211 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 SLC35G2Q8TBE7 412 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 OSBPL2Q9H1P3 480 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 ABCB8Q9NUT2 735 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 POLR3BQ9NW08 1133 aaPredicted RBP14.77□□□□□ -0.04
CBWD3-217ENST00000621474 CTTNBP2NLQ9P2B4 639 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 UVRAGQ9P2Y5 699 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 OR12D3Q9UGF7 316 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 INTUQ9ULD6 942 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 STARD13Q9Y3M8 1113 aa14.77□□□□□ -0.04
CBWD3-217ENST00000621474 A0A1B0GVM2 712 aa14.77□□□□□ -0.05
CBWD3-217ENST00000621474 TBC1D3BA6NDS4 549 aa14.77□□□□□ -0.05
CBWD3-217ENST00000621474 TCAF2A6NFQ2 919 aa14.77□□□□□ -0.05
CBWD3-217ENST00000621474 DRGXA6NNA5 263 aa14.77□□□□□ -0.05
CBWD3-217ENST00000621474 LUC7L3O95232 432 aaKnown RBP14.77□□□□□ -0.05
CBWD3-217ENST00000621474 IL1R2P27930 398 aa14.77□□□□□ -0.05
CBWD3-217ENST00000621474 HOXC13P31276 330 aa14.77□□□□□ -0.05
CBWD3-217ENST00000621474 CYLC1P35663 651 aaPredicted RBP14.77□□□□□ -0.05
CBWD3-217ENST00000621474 MAGEA9P43362 315 aa14.77□□□□□ -0.05
CBWD3-217ENST00000621474 SEC13P55735 322 aa14.77□□□□□ -0.05
CBWD3-217ENST00000621474 NRG1Q02297 640 aaPredicted RBP14.77□□□□□ -0.05
CBWD3-217ENST00000621474 ARL13BQ3SXY8 428 aa14.77□□□□□ -0.05
CBWD3-217ENST00000621474 C10orf76Q5T2E6 689 aa14.77□□□□□ -0.05
CBWD3-217ENST00000621474 CXorf57Q6NSI4 855 aaKnown RBP14.77□□□□□ -0.05
CBWD3-217ENST00000621474 SCYL2Q6P3W7 929 aa14.77□□□□□ -0.05
CBWD3-217ENST00000621474 ADIPOR2Q86V24 386 aa14.77□□□□□ -0.05
CBWD3-217ENST00000621474 DTWD2Q8NBA8 298 aa14.77□□□□□ -0.05
CBWD3-217ENST00000621474 RPLP0P6Q8NHW5 317 aa14.77□□□□□ -0.05
CBWD3-217ENST00000621474 USP33Q8TEY7 942 aa14.77□□□□□ -0.05
CBWD3-217ENST00000621474 EXOC4Q96A65 974 aa14.77□□□□□ -0.05
CBWD3-217ENST00000621474 MPP6Q9NZW5 540 aa14.77□□□□□ -0.05
CBWD3-217ENST00000621474 INTS6Q9UL03 887 aaKnown RBP14.77□□□□□ -0.05
CBWD3-217ENST00000621474 PCDHA13Q9Y5I0 950 aa14.77□□□□□ -0.05
CBWD3-217ENST00000621474 MUC6Q6W4X9 2439 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 CKAP5Q14008 2032 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 MTA2O94776 668 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 LRIG2O94898 1065 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 PCK1P35558 622 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 MAGEA1P43355 309 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 TNFRSF4P43489 277 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 AIF1P55008 147 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 SLC25A11Q02978 314 aaKnown RBP14.76□□□□□ -0.05
CBWD3-217ENST00000621474 LMAN2Q12907 356 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 PIGHQ14442 188 aaPredicted RBP14.76□□□□□ -0.05
CBWD3-217ENST00000621474 ACAP1Q15027 740 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 TCEAL1Q15170 157 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 CA9Q16790 459 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 RABGAP1LQ5R372 815 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 ACBD5Q5T8D3 534 aaPredicted RBP14.76□□□□□ -0.05
CBWD3-217ENST00000621474 TTC39BQ5VTQ0 682 aaPredicted RBP14.76□□□□□ -0.05
CBWD3-217ENST00000621474 TXNRD3NBQ6F5E7 133 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 MAMSTRQ6ZN01 415 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 ANKS1BQ7Z6G8 1248 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 CARNMT1Q8N4J0 409 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 ACRBPQ8NEB7 543 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 RFFLQ8WZ73 363 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 SNRNP25Q9BV90 132 aaKnown RBP14.76□□□□□ -0.05
CBWD3-217ENST00000621474 GPATCH2LQ9NWQ4 482 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 PCSK1NQ9UHG2 260 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 IP6K2Q9UHH9 426 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 GGA2Q9UJY4 613 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 USP18Q9UMW8 372 aa14.76□□□□□ -0.05
CBWD3-217ENST00000621474 NUP205Q92621 2012 aa14.75□□□□□ -0.05
CBWD3-217ENST00000621474 TYW5A2RUC4 315 aaKnown RBP14.75□□□□□ -0.05
CBWD3-217ENST00000621474 CHURC1-FNTBB4DL54 471 aa14.75□□□□□ -0.05
CBWD3-217ENST00000621474 MYO1FO00160 1098 aa14.75□□□□□ -0.05
CBWD3-217ENST00000621474 SRGAP2O75044 1071 aa14.75□□□□□ -0.05
CBWD3-217ENST00000621474 RNF8O76064 485 aa14.75□□□□□ -0.05
CBWD3-217ENST00000621474 PABPC1P11940 636 aaKnown RBP14.75□□□□□ -0.05
CBWD3-217ENST00000621474 MRE11P49959 708 aa14.75□□□□□ -0.05
CBWD3-217ENST00000621474 GSDMDP57764 484 aa14.75□□□□□ -0.05
CBWD3-217ENST00000621474 CDH18Q13634 790 aa14.75□□□□□ -0.05
CBWD3-217ENST00000621474 FUT11Q495W5 492 aa14.75□□□□□ -0.05
CBWD3-217ENST00000621474 PREPLQ4J6C6 727 aaPredicted RBP14.75□□□□□ -0.05
CBWD3-217ENST00000621474 C2orf27AQ580R0 203 aa14.75□□□□□ -0.05
CBWD3-217ENST00000621474 EGFLAMQ63HQ2 1017 aa14.75□□□□□ -0.05
CBWD3-217ENST00000621474 IL17RCQ8NAC3 791 aa14.75□□□□□ -0.05
CBWD3-217ENST00000621474 ACOX2Q99424 681 aa14.75□□□□□ -0.05
CBWD3-217ENST00000621474 NDFIP2Q9NV92 336 aa14.75□□□□□ -0.05
CBWD3-217ENST00000621474 PPARGC1AQ9UBK2 798 aaKnown RBP14.75□□□□□ -0.05
CBWD3-217ENST00000621474 SALL4Q9UJQ4 1053 aa14.75□□□□□ -0.05
CBWD3-217ENST00000621474 TBC1D30Q9Y2I9 924 aa14.75□□□□□ -0.05
CBWD3-217ENST00000621474 EML5Q05BV3 1969 aa14.75□□□□□ -0.05
CBWD3-217ENST00000621474 FANCMQ8IYD8 2048 aa14.75□□□□□ -0.05
CBWD3-217ENST00000621474 A0A0U1RQJ8 604 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms