RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 MNS1Q8NEH6 495 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 SPATA4Q8NEY3 305 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 ZSCAN18Q8TBC5 510 aaPredicted RBP8.28□□□□□ -1.08
CPNE3-209ENST00000620393 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.28□□□□□ -1.08
CPNE3-209ENST00000620393 SUSD6Q92537 303 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 SMARCD2Q92925 531 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 TBC1D31Q96DN5 1066 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 ASB16Q96NS5 453 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 GUCD1Q96NT3 240 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 NECTIN4Q96NY8 510 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 CARD6Q9BX69 1037 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 SMG9Q9H0W8 520 aaKnown RBP8.28□□□□□ -1.08
CPNE3-209ENST00000620393 RETREG1Q9H6L5 497 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 KIF9Q9HAQ2 790 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 TRPV4Q9HBA0 871 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 ARHGEF4Q9NR80 690 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 HOMER3Q9NSC5 361 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 SMARCAL1Q9NZC9 954 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 CD207Q9UJ71 328 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 CDH22Q9UJ99 828 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 CDH7Q9ULB5 785 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 CCL26Q9Y258 94 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 NR2E1Q9Y466 385 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 ZFP37Q9Y6Q3 630 aaPredicted RBP8.28□□□□□ -1.08
CPNE3-209ENST00000620393 MYH10P35580 1976 aa8.28□□□□□ -1.08
CPNE3-209ENST00000620393 CTAGE15A4D2H0 777 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 WASH4PA8MWX3 477 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 F5H5T6 163 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 CCDC188H7C350 402 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 GFRA2O00451 464 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 APOL1O14791 398 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 DCLK1O15075 740 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 FGF10O15520 208 aaPredicted RBP8.27□□□□□ -1.09
CPNE3-209ENST00000620393 PRAMEF12O95522 483 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 CTAGE8P0CG41 777 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 FOSL2P15408 326 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 RHOQP17081 205 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 SLC6A4P31645 630 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 CHKAP35790 457 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 GGCXP38435 758 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 NR2C2P49116 596 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 PTPN5P54829 565 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 PAFAH1B3Q15102 231 aaKnown RBP8.27□□□□□ -1.09
CPNE3-209ENST00000620393 CCDC85BQ15834 202 aaPredicted RBP8.27□□□□□ -1.09
CPNE3-209ENST00000620393 CCNG2Q16589 344 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 RWDD4Q6NW29 188 aaKnown RBP8.27□□□□□ -1.09
CPNE3-209ENST00000620393 GET4Q7L5D6 327 aaPredicted RBP8.27□□□□□ -1.09
CPNE3-209ENST00000620393 ADAT2Q7Z6V5 191 aaKnown RBP8.27□□□□□ -1.09
CPNE3-209ENST00000620393 CTAGE6Q86UF2 777 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 CHSY1Q86X52 802 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 BBS7Q8IWZ6 715 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 CTAGE4Q8IX94 777 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 FAM217AQ8IXS0 508 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 LGI2Q8N0V4 545 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 CPXM2Q8N436 756 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 LZTR1Q8N653 840 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 PRELID2Q8N945 189 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 TTC13Q8NBP0 860 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 SMRP1Q8NCR6 262 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 IGSF8Q969P0 613 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 E2F7Q96AV8 911 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 TMA16Q96EY4 203 aaKnown RBP8.27□□□□□ -1.09
CPNE3-209ENST00000620393 RPGRIP1Q96KN7 1286 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 RPRD1AQ96P16 312 aaPredicted RBP8.27□□□□□ -1.09
CPNE3-209ENST00000620393 LRRC3BQ96PB8 259 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 MYADMQ96S97 322 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 AP1M1Q9BXS5 423 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 FRMD8P1Q9BZ68 369 aaPredicted RBP8.27□□□□□ -1.09
CPNE3-209ENST00000620393 ZYG11BQ9C0D3 744 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 LRRC19Q9H756 370 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 CATSPERBQ9H7T0 1116 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 ETNK2Q9NVF9 386 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 OBP2AQ9NY56 170 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 DONSONQ9NYP3 566 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 TBC1D14Q9P2M4 693 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 RABGEF1Q9UJ41 708 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 VANGL2Q9ULK5 521 aa8.27□□□□□ -1.09
CPNE3-209ENST00000620393 ARIH1Q9Y4X5 557 aaPredicted RBP8.27□□□□□ -1.09
CPNE3-209ENST00000620393 PRRC2BQ5JSZ5 2229 aaKnown RBP8.27□□□□□ -1.09
CPNE3-209ENST00000620393 PLXNA3P51805 1871 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 GOLGA6L10A0A0M3HER8 536 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 H3BQ06 376 aaPredicted RBP8.26□□□□□ -1.09
CPNE3-209ENST00000620393 APOC4-APOC2K7ER74 178 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 SLC9A3R1O14745 358 aaPredicted RBP8.26□□□□□ -1.09
CPNE3-209ENST00000620393 CNTN5O94779 1100 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 SLU7O95391 586 aaKnown RBP8.26□□□□□ -1.09
CPNE3-209ENST00000620393 APOC2P02655 101 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 LAMP2P13473 410 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 TGM2P21980 687 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 VIPR2P41587 438 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 DYNLT1P63172 113 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 TUBB4BP68371 445 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 SLC10A2Q12908 348 aaPredicted RBP8.26□□□□□ -1.09
CPNE3-209ENST00000620393 SKIV2LQ15477 1246 aaKnown RBP8.26□□□□□ -1.09
CPNE3-209ENST00000620393 ZNF77Q15935 545 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 CYP1B1Q16678 543 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 ALFQ53S48 1182 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 RABGAP1LQ5R372 815 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 NCBP2-AS2Q69YL0 99 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 TANGO2Q6ICL3 276 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms