RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 UPK3BL1B0FP48 263 aa23.71■■□□□ 1.39
CCDC61-207ENST00000599044 UPK3BL2E5RIL1 263 aa23.71■■□□□ 1.39
CCDC61-207ENST00000599044 FOXN3O00409 490 aaPredicted RBP23.71■■□□□ 1.39
CCDC61-207ENST00000599044 GJB3O75712 270 aa23.71■■□□□ 1.39
CCDC61-207ENST00000599044 SYPP08247 313 aa23.71■■□□□ 1.39
CCDC61-207ENST00000599044 CLCN1P35523 988 aa23.71■■□□□ 1.39
CCDC61-207ENST00000599044 NUMBP49757 651 aa23.71■■□□□ 1.39
CCDC61-207ENST00000599044 BNC1Q01954 994 aa23.71■■□□□ 1.39
CCDC61-207ENST00000599044 GRIK2Q13002 908 aa23.71■■□□□ 1.39
CCDC61-207ENST00000599044 HDDC3Q8N4P3 179 aa23.71■■□□□ 1.39
CCDC61-207ENST00000599044 C1orf216Q8TAB5 229 aa23.71■■□□□ 1.39
CCDC61-207ENST00000599044 CAMK1GQ96NX5 476 aa23.71■■□□□ 1.39
CCDC61-207ENST00000599044 DDX50Q9BQ39 737 aaKnown RBP23.71■■□□□ 1.39
CCDC61-207ENST00000599044 SUSD2Q9UGT4 822 aa23.71■■□□□ 1.39
CCDC61-207ENST00000599044 EIF2B4Q9UI10 523 aaKnown RBP23.71■■□□□ 1.39
CCDC61-207ENST00000599044 DNAJC12Q9UKB3 198 aa23.71■■□□□ 1.39
CCDC61-207ENST00000599044 GRAP2O75791 330 aa23.7■■□□□ 1.38
CCDC61-207ENST00000599044 GNSP15586 552 aa23.7■■□□□ 1.38
CCDC61-207ENST00000599044 TACR2P21452 398 aa23.7■■□□□ 1.38
CCDC61-207ENST00000599044 MIIPQ5JXC2 388 aa23.7■■□□□ 1.38
CCDC61-207ENST00000599044 SLC47A2Q86VL8 602 aa23.7■■□□□ 1.38
CCDC61-207ENST00000599044 DEFB106AQ8N104 65 aa23.7■■□□□ 1.38
CCDC61-207ENST00000599044 PPP1R13BQ96KQ4 1090 aa23.7■■□□□ 1.38
CCDC61-207ENST00000599044 FAM81BQ96LP2 452 aa23.7■■□□□ 1.38
CCDC61-207ENST00000599044 SLC2A13Q96QE2 648 aa23.7■■□□□ 1.38
CCDC61-207ENST00000599044 SLC32A1Q9H598 525 aa23.7■■□□□ 1.38
CCDC61-207ENST00000599044 PLCB1Q9NQ66 1216 aa23.7■■□□□ 1.38
CCDC61-207ENST00000599044 PCDHGC3Q9UN70 934 aa23.7■■□□□ 1.38
CCDC61-207ENST00000599044 NFE2L3Q9Y4A8 694 aa23.7■■□□□ 1.38
CCDC61-207ENST00000599044 ZZEF1O43149 2961 aa23.69■■□□□ 1.38
CCDC61-207ENST00000599044 SYNJ2BP-COX16A0A087WUM0 186 aa23.69■■□□□ 1.38
CCDC61-207ENST00000599044 A0A1B0GTW7 788 aa23.69■■□□□ 1.38
CCDC61-207ENST00000599044 LUC7L3O95232 432 aaKnown RBP23.69■■□□□ 1.38
CCDC61-207ENST00000599044 CDH18Q13634 790 aa23.69■■□□□ 1.38
CCDC61-207ENST00000599044 TPD52L1Q16890 204 aaPredicted RBP23.69■■□□□ 1.38
CCDC61-207ENST00000599044 PITRM1Q5JRX3 1037 aa23.69■■□□□ 1.38
CCDC61-207ENST00000599044 FAM183BPQ6ZVS7 135 aa23.69■■□□□ 1.38
CCDC61-207ENST00000599044 CHSY1Q86X52 802 aa23.69■■□□□ 1.38
CCDC61-207ENST00000599044 CIR1Q86X95 450 aaPredicted RBP23.69■■□□□ 1.38
CCDC61-207ENST00000599044 APCDD1Q8J025 514 aa23.69■■□□□ 1.38
CCDC61-207ENST00000599044 C1orf131Q8NDD1 294 aaKnown RBP23.69■■□□□ 1.38
CCDC61-207ENST00000599044 BTN2A3PQ96KV6 586 aa23.69■■□□□ 1.38
CCDC61-207ENST00000599044 PRMT1Q99873 361 aaKnown RBP23.69■■□□□ 1.38
CCDC61-207ENST00000599044 IL21RQ9HBE5 538 aa23.69■■□□□ 1.38
CCDC61-207ENST00000599044 COX16Q9P0S2 106 aa23.69■■□□□ 1.38
CCDC61-207ENST00000599044 SUN2Q9UH99 717 aa23.69■■□□□ 1.38
CCDC61-207ENST00000599044 KCNU1A8MYU2 1149 aa23.68■■□□□ 1.38
CCDC61-207ENST00000599044 SH3BP5O60239 455 aa23.68■■□□□ 1.38
CCDC61-207ENST00000599044 SIN3BO75182 1162 aa23.68■■□□□ 1.38
CCDC61-207ENST00000599044 APOEP02649 317 aa23.68■■□□□ 1.38
CCDC61-207ENST00000599044 ERBB2P04626 1255 aa23.68■■□□□ 1.38
CCDC61-207ENST00000599044 SIM1P81133 766 aaPredicted RBP23.68■■□□□ 1.38
CCDC61-207ENST00000599044 MAN2A1Q16706 1144 aa23.68■■□□□ 1.38
CCDC61-207ENST00000599044 DHX40Q8IX18 779 aaKnown RBP23.68■■□□□ 1.38
CCDC61-207ENST00000599044 TRIM62Q9BVG3 475 aa23.68■■□□□ 1.38
CCDC61-207ENST00000599044 RSPH9Q9H1X1 276 aaPredicted RBP23.68■■□□□ 1.38
CCDC61-207ENST00000599044 NDST4Q9H3R1 872 aa23.68■■□□□ 1.38
CCDC61-207ENST00000599044 SLCO3A1Q9UIG8 710 aa23.68■■□□□ 1.38
CCDC61-207ENST00000599044 ERVW-1Q9UQF0 538 aa23.68■■□□□ 1.38
CCDC61-207ENST00000599044 SPEGQ15772 3267 aa23.68■■□□□ 1.38
CCDC61-207ENST00000599044 FAM170AA1A519 330 aa23.67■■□□□ 1.38
CCDC61-207ENST00000599044 TYW5A2RUC4 315 aaKnown RBP23.67■■□□□ 1.38
CCDC61-207ENST00000599044 TTC34A8MYJ7 566 aa23.67■■□□□ 1.38
CCDC61-207ENST00000599044 C1QTNF9BB2RNN3 333 aa23.67■■□□□ 1.38
CCDC61-207ENST00000599044 H0Y626 953 aa23.67■■□□□ 1.38
CCDC61-207ENST00000599044 BCAT2O15382 392 aaPredicted RBP23.67■■□□□ 1.38
CCDC61-207ENST00000599044 MBD3O95983 291 aa23.67■■□□□ 1.38
CCDC61-207ENST00000599044 C1QTNF9P0C862 333 aa23.67■■□□□ 1.38
CCDC61-207ENST00000599044 PTK2Q05397 1052 aa23.67■■□□□ 1.38
CCDC61-207ENST00000599044 KCNMA1Q12791 1236 aa23.67■■□□□ 1.38
CCDC61-207ENST00000599044 VWA3BQ502W6 1294 aa23.67■■□□□ 1.38
CCDC61-207ENST00000599044 C9orf64Q5T6V5 341 aa23.67■■□□□ 1.38
CCDC61-207ENST00000599044 OLFML1Q6UWY5 402 aa23.67■■□□□ 1.38
CCDC61-207ENST00000599044 ZNF557Q8N988 423 aaPredicted RBP23.67■■□□□ 1.38
CCDC61-207ENST00000599044 FAM204AQ9H8W3 233 aa23.67■■□□□ 1.38
CCDC61-207ENST00000599044 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.67■■□□□ 1.38
CCDC61-207ENST00000599044 DDIT4Q9NX09 232 aa23.67■■□□□ 1.38
CCDC61-207ENST00000599044 SERGEFQ9UGK8 458 aa23.67■■□□□ 1.38
CCDC61-207ENST00000599044 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.67■■□□□ 1.38
CCDC61-207ENST00000599044 WDFY3Q8IZQ1 3526 aa23.67■■□□□ 1.38
CCDC61-207ENST00000599044 DNTTP04053 509 aa23.66■■□□□ 1.38
CCDC61-207ENST00000599044 HNRNPA1L2Q32P51 320 aaKnown RBP23.66■■□□□ 1.38
CCDC61-207ENST00000599044 PTPN20Q4JDL3 420 aa23.66■■□□□ 1.38
CCDC61-207ENST00000599044 OR6B2Q6IFH4 312 aa23.66■■□□□ 1.38
CCDC61-207ENST00000599044 FAM71AQ8IYT1 594 aa23.66■■□□□ 1.38
CCDC61-207ENST00000599044 SNX19Q92543 992 aa23.66■■□□□ 1.38
CCDC61-207ENST00000599044 RPL10LQ96L21 214 aaKnown RBP23.66■■□□□ 1.38
CCDC61-207ENST00000599044 TUBGCP2Q9BSJ2 902 aa23.66■■□□□ 1.38
CCDC61-207ENST00000599044 SCNM1Q9BWG6 230 aa23.66■■□□□ 1.38
CCDC61-207ENST00000599044 ADAM33Q9BZ11 813 aa23.66■■□□□ 1.38
CCDC61-207ENST00000599044 KIAA1522Q9P206 1035 aaPredicted RBP23.66■■□□□ 1.38
CCDC61-207ENST00000599044 HYAL3O43820 417 aaPredicted RBP23.65■■□□□ 1.38
CCDC61-207ENST00000599044 SEMA4FO95754 770 aa23.65■■□□□ 1.38
CCDC61-207ENST00000599044 ASLP04424 464 aa23.65■■□□□ 1.38
CCDC61-207ENST00000599044 GLI1P08151 1106 aa23.65■■□□□ 1.38
CCDC61-207ENST00000599044 PRKCSHP14314 528 aaPredicted RBP23.65■■□□□ 1.38
CCDC61-207ENST00000599044 MZF1P28698 734 aaPredicted RBP23.65■■□□□ 1.38
CCDC61-207ENST00000599044 CSNK1EP49674 416 aaKnown RBP23.65■■□□□ 1.38
CCDC61-207ENST00000599044 STK19P49842 368 aaPredicted RBP23.65■■□□□ 1.38
CCDC61-207ENST00000599044 IRAK1P51617 712 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms