RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 ARHGAP20Q9P2F6 1191 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 EBF1Q9UH73 591 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 ADAMTS1Q9UHI8 967 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 VANGL2Q9ULK5 521 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 SNX10Q9Y5X0 201 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 MUC22E2RYF6 1773 aaPredicted RBP22.63■■□□□ 1.21
HOMER3-206ENST00000594439 ATMINO43313 823 aaPredicted RBP22.63■■□□□ 1.21
HOMER3-206ENST00000594439 IRAK1P51617 712 aa22.63■■□□□ 1.21
HOMER3-206ENST00000594439 MAMLD1Q13495 774 aa22.63■■□□□ 1.21
HOMER3-206ENST00000594439 ENPP2Q13822 863 aa22.63■■□□□ 1.21
HOMER3-206ENST00000594439 ARID5BQ14865 1188 aa22.63■■□□□ 1.21
HOMER3-206ENST00000594439 FSCBQ5H9T9 825 aa22.63■■□□□ 1.21
HOMER3-206ENST00000594439 TTC39BQ5VTQ0 682 aaPredicted RBP22.63■■□□□ 1.21
HOMER3-206ENST00000594439 CIR1Q86X95 450 aaPredicted RBP22.63■■□□□ 1.21
HOMER3-206ENST00000594439 DRC7Q8IY82 874 aa22.63■■□□□ 1.21
HOMER3-206ENST00000594439 ZNF683Q8IZ20 524 aa22.63■■□□□ 1.21
HOMER3-206ENST00000594439 AHI1Q8N157 1196 aa22.63■■□□□ 1.21
HOMER3-206ENST00000594439 SORCS1Q8WY21 1168 aa22.63■■□□□ 1.21
HOMER3-206ENST00000594439 NKD2Q969F2 451 aaPredicted RBP22.63■■□□□ 1.21
HOMER3-206ENST00000594439 C1orf74Q96LT6 269 aa22.63■■□□□ 1.21
HOMER3-206ENST00000594439 RPRD1AQ96P16 312 aaPredicted RBP22.63■■□□□ 1.21
HOMER3-206ENST00000594439 DNAJC7Q99615 494 aa22.63■■□□□ 1.21
HOMER3-206ENST00000594439 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.63■■□□□ 1.21
HOMER3-206ENST00000594439 CIPCQ9C0C6 399 aa22.63■■□□□ 1.21
HOMER3-206ENST00000594439 CACNA2D2Q9NY47 1150 aa22.63■■□□□ 1.21
HOMER3-206ENST00000594439 A0A1B0GVM2 712 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 A0A1W2PQF6 199 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 TCAF2A6NFQ2 919 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 HRO43593 1189 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 HOXB2P14652 356 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 ZNF143P52747 638 aaPredicted RBP22.62■■□□□ 1.21
HOMER3-206ENST00000594439 HDAC4P56524 1084 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 CDH18Q13634 790 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 FUT11Q495W5 492 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 ARTNQ5T4W7 220 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 MBLAC2Q68D91 279 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 SDE2Q6IQ49 451 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 VPS36Q86VN1 386 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 RASSF3Q86WH2 238 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 CCAR2Q8N163 923 aaKnown RBP22.62■■□□□ 1.21
HOMER3-206ENST00000594439 OR8K1Q8NGG5 319 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 FAM172AQ8WUF8 416 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 HAPLN3Q96S86 360 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 TRIM5Q9C035 493 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 CD248Q9HCU0 757 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 POLMQ9NP87 494 aaPredicted RBP22.62■■□□□ 1.21
HOMER3-206ENST00000594439 PARVAQ9NVD7 372 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 INTS6Q9UL03 887 aaKnown RBP22.62■■□□□ 1.21
HOMER3-206ENST00000594439 STON1Q9Y6Q2 735 aa22.62■■□□□ 1.21
HOMER3-206ENST00000594439 DOCK4Q8N1I0 1966 aa22.61■■□□□ 1.21
HOMER3-206ENST00000594439 A0A087X0T9 212 aa22.61■■□□□ 1.21
HOMER3-206ENST00000594439 ANKRD62A6NC57 917 aa22.61■■□□□ 1.21
HOMER3-206ENST00000594439 WASH3PC4AMC7 463 aa22.61■■□□□ 1.21
HOMER3-206ENST00000594439 H0Y626 953 aa22.61■■□□□ 1.21
HOMER3-206ENST00000594439 NPC1O15118 1278 aa22.61■■□□□ 1.21
HOMER3-206ENST00000594439 AXIN1O15169 862 aa22.61■■□□□ 1.21
HOMER3-206ENST00000594439 CCP110O43303 1012 aa22.61■■□□□ 1.21
HOMER3-206ENST00000594439 FAM228BP0C875 321 aa22.61■■□□□ 1.21
HOMER3-206ENST00000594439 IL12RB1P42701 662 aa22.61■■□□□ 1.21
HOMER3-206ENST00000594439 OGDHQ02218 1023 aa22.61■■□□□ 1.21
HOMER3-206ENST00000594439 SRSF5Q13243 272 aaKnown RBP22.61■■□□□ 1.21
HOMER3-206ENST00000594439 ZNF234Q14588 700 aa22.61■■□□□ 1.21
HOMER3-206ENST00000594439 ACBD5Q5T8D3 534 aaPredicted RBP22.61■■□□□ 1.21
HOMER3-206ENST00000594439 DCUN1D2Q6PH85 259 aa22.61■■□□□ 1.21
HOMER3-206ENST00000594439 CCDC117Q8IWD4 279 aaPredicted RBP22.61■■□□□ 1.21
HOMER3-206ENST00000594439 ZNF653Q96CK0 615 aa22.61■■□□□ 1.21
HOMER3-206ENST00000594439 CNPY3Q9BT09 278 aa22.61■■□□□ 1.21
HOMER3-206ENST00000594439 EPC1Q9H2F5 836 aa22.61■■□□□ 1.21
HOMER3-206ENST00000594439 CNOT8Q9UFF9 292 aaKnown RBP22.61■■□□□ 1.21
HOMER3-206ENST00000594439 CKAP5Q14008 2032 aa22.6■■□□□ 1.21
HOMER3-206ENST00000594439 PRR23AA6NEV1 266 aa22.6■■□□□ 1.21
HOMER3-206ENST00000594439 DRGXA6NNA5 263 aa22.6■■□□□ 1.21
HOMER3-206ENST00000594439 CNR2P34972 360 aa22.6■■□□□ 1.21
HOMER3-206ENST00000594439 ADRA1BP35368 520 aa22.6■■□□□ 1.21
HOMER3-206ENST00000594439 TBX2Q13207 712 aaPredicted RBP22.6■■□□□ 1.21
HOMER3-206ENST00000594439 E2F5Q15329 346 aa22.6■■□□□ 1.21
HOMER3-206ENST00000594439 ANO7Q6IWH7 933 aa22.6■■□□□ 1.21
HOMER3-206ENST00000594439 KIAA1211LQ6NV74 962 aa22.6■■□□□ 1.21
HOMER3-206ENST00000594439 ASCL5Q7RTU5 278 aa22.6■■□□□ 1.21
HOMER3-206ENST00000594439 SUMF1Q8NBK3 374 aa22.6■■□□□ 1.21
HOMER3-206ENST00000594439 MDGA1Q8NFP4 955 aa22.6■■□□□ 1.21
HOMER3-206ENST00000594439 CYB5D2Q8WUJ1 264 aa22.6■■□□□ 1.21
HOMER3-206ENST00000594439 TTC17Q96AE7 1141 aa22.6■■□□□ 1.21
HOMER3-206ENST00000594439 TRIM11Q96F44 468 aa22.6■■□□□ 1.21
HOMER3-206ENST00000594439 KIAA1522Q9P206 1035 aaPredicted RBP22.6■■□□□ 1.21
HOMER3-206ENST00000594439 NENFQ9UMX5 172 aa22.6■■□□□ 1.21
HOMER3-206ENST00000594439 RAD54BQ9Y620 910 aa22.6■■□□□ 1.21
HOMER3-206ENST00000594439 TCRBV21S2A2A0A5A6 115 aa22.59■■□□□ 1.21
HOMER3-206ENST00000594439 TMEM191CA6NGB0 347 aa22.59■■□□□ 1.21
HOMER3-206ENST00000594439 MFAP3LO75121 409 aa22.59■■□□□ 1.21
HOMER3-206ENST00000594439 CNTN5O94779 1100 aa22.59■■□□□ 1.21
HOMER3-206ENST00000594439 ALDH1A2O94788 518 aa22.59■■□□□ 1.21
HOMER3-206ENST00000594439 LMNAP02545 664 aaKnown RBP22.59■■□□□ 1.21
HOMER3-206ENST00000594439 TPM1P09493 284 aa22.59■■□□□ 1.21
HOMER3-206ENST00000594439 MYBL1P10243 752 aa22.59■■□□□ 1.21
HOMER3-206ENST00000594439 POLR2EP19388 210 aaKnown RBP22.59■■□□□ 1.21
HOMER3-206ENST00000594439 EIF4A3P38919 411 aaKnown RBP22.59■■□□□ 1.21
HOMER3-206ENST00000594439 MRE11P49959 708 aa22.59■■□□□ 1.21
HOMER3-206ENST00000594439 PTPRNQ16849 979 aa22.59■■□□□ 1.21
HOMER3-206ENST00000594439 PITRM1Q5JRX3 1037 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms