RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 PYROXD2Q8N2H3 581 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 OR6B3Q8NGW1 331 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 SLC7A14Q8TBB6 771 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 CERS2Q96G23 380 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 OTUD5Q96G74 571 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 ADAMTS10Q9H324 1103 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 SYBUQ9NX95 663 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 TMEM114B3SHH9 223 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 XPO1O14980 1071 aaKnown RBP11.91□□□□□ -0.5
ZNF540-210ENST00000592533 MAP3K13O43283 966 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 CASC4Q6P4E1 433 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 DHDDSQ86SQ9 333 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 RASSF3Q86WH2 238 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 RNF139Q8WU17 664 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 CMTM5Q96DZ9 223 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 RBBP8Q99708 897 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 MCMBPQ9BTE3 642 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 ELP3Q9H9T3 547 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.9□□□□□ -0.5
ZNF540-210ENST00000592533 RALBP11234 206 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 PSMB4P28070 264 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 CSRP3P50461 194 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 CRADDP78560 199 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 ZNF567Q8N184 647 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 GSTCDQ8NEC7 633 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 PPP2R3CQ969Q6 453 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 DNAI2Q9GZS0 605 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 KATNBL1Q9H079 304 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 SNTG2Q9NY99 539 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 TMEM216Q9P0N5 145 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 TBC1D30Q9Y2I9 924 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 MEI4A8MW99 385 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 DCLK1O15075 740 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 H2AFYO75367 372 aaKnown RBP11.9□□□□□ -0.5
ZNF540-210ENST00000592533 LYNP07948 512 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 ZNF286BP0CG31 522 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 LCP1P13796 627 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 ACAT1P24752 427 aaKnown RBP11.9□□□□□ -0.5
ZNF540-210ENST00000592533 SERPINB8P50452 374 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 LIMK2P53671 638 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 AIF1P55008 147 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 CCNIQ14094 377 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 GRIK4Q16099 956 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 ZNF792Q3KQV3 632 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 FOXB2Q5VYV0 432 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 METTL21CQ5VZV1 264 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 TMEM135Q86UB9 458 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 PDSS2Q86YH6 399 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 GALNT15Q8N3T1 639 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 PHC3Q8NDX5 983 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 C18orf25Q96B23 403 aaPredicted RBP11.9□□□□□ -0.5
ZNF540-210ENST00000592533 NPY6RQ99463 290 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 LPIN3Q9BQK8 851 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 GORASP1Q9BQQ3 440 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 PNPOQ9NVS9 261 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 GJD2Q9UKL4 321 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 UBQLN1Q9UMX0 589 aaKnown RBP11.9□□□□□ -0.5
ZNF540-210ENST00000592533 CDY2AQ9Y6F7 541 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 CDY1Q9Y6F8 540 aa11.9□□□□□ -0.5
ZNF540-210ENST00000592533 UPP2O95045 317 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 PEX19P40855 299 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 SESN2P58004 480 aaPredicted RBP11.89□□□□□ -0.51
ZNF540-210ENST00000592533 SLC25A3Q00325 362 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 XKR4Q5GH76 650 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 FBXO47Q5MNV8 452 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 PDPK2PQ6A1A2 396 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 EPGNQ6UW88 154 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 RFX8Q6ZV50 586 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 ACAD11Q709F0 780 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 SLC2A13Q96QE2 648 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 SNX15Q9NRS6 342 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 IL1RAPL1Q9NZN1 696 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 CDH22Q9UJ99 828 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 NR2E3Q9Y5X4 410 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 H3BRB1 525 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 CASQ2O14958 399 aaPredicted RBP11.89□□□□□ -0.51
ZNF540-210ENST00000592533 SMIM24O75264 130 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 USP1O94782 785 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 CD4P01730 458 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 MPOP05164 745 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 CPA3P15088 417 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 CALRP27797 417 aaKnown RBP11.89□□□□□ -0.51
ZNF540-210ENST00000592533 ADORA2BP29275 332 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 TYK2P29597 1187 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 GNL1P36915 607 aaPredicted RBP11.89□□□□□ -0.51
ZNF540-210ENST00000592533 PNPLA4P41247 253 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 SULT1E1P49888 294 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 HK2P52789 917 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 IRX4P78413 519 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 CDC42EP1Q00587 391 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 GJC2Q5T442 439 aaPredicted RBP11.89□□□□□ -0.51
ZNF540-210ENST00000592533 RNF220Q5VTB9 566 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 SLC30A9Q6PML9 568 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 DEFB132Q7Z7B7 95 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 FAM131BQ86XD5 332 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 ANKRD13AQ8IZ07 590 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 DEFB106AQ8N104 65 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 KCTD13Q8WZ19 329 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 ZNF560Q96MR9 790 aa11.89□□□□□ -0.51
ZNF540-210ENST00000592533 SLC9A7Q96T83 725 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms