RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 CDH18Q13634 790 aa19.55■□□□□ 0.72
CCDC43-205ENST00000592333 SUZ12Q15022 739 aaKnown RBP19.55■□□□□ 0.72
CCDC43-205ENST00000592333 HNRNPA1L2Q32P51 320 aaKnown RBP19.55■□□□□ 0.72
CCDC43-205ENST00000592333 OR2I1PQ8NGU4 316 aa19.55■□□□□ 0.72
CCDC43-205ENST00000592333 WFDC5Q8TCV5 224 aa19.55■□□□□ 0.72
CCDC43-205ENST00000592333 MYO19Q96H55 970 aa19.55■□□□□ 0.72
CCDC43-205ENST00000592333 PRICKLE1Q96MT3 831 aaPredicted RBP19.55■□□□□ 0.72
CCDC43-205ENST00000592333 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.55■□□□□ 0.72
CCDC43-205ENST00000592333 NAALADL1Q9UQQ1 740 aa19.55■□□□□ 0.72
CCDC43-205ENST00000592333 APOBEC2Q9Y235 224 aaKnown RBP19.55■□□□□ 0.72
CCDC43-205ENST00000592333 GTPBP10A4D1E9 387 aaKnown RBP19.54■□□□□ 0.72
CCDC43-205ENST00000592333 FLRT2O43155 660 aa19.54■□□□□ 0.72
CCDC43-205ENST00000592333 DFNA5O60443 496 aa19.54■□□□□ 0.72
CCDC43-205ENST00000592333 LUC7L3O95232 432 aaKnown RBP19.54■□□□□ 0.72
CCDC43-205ENST00000592333 TOP3BO95985 862 aaKnown RBP19.54■□□□□ 0.72
CCDC43-205ENST00000592333 IGLV3-25P01717 112 aa19.54■□□□□ 0.72
CCDC43-205ENST00000592333 KRT5P13647 590 aa19.54■□□□□ 0.72
CCDC43-205ENST00000592333 SPINK2P20155 84 aa19.54■□□□□ 0.72
CCDC43-205ENST00000592333 CD27P26842 260 aa19.54■□□□□ 0.72
CCDC43-205ENST00000592333 FAM193AP78312 1265 aa19.54■□□□□ 0.72
CCDC43-205ENST00000592333 EIF4EBP2Q13542 120 aaPredicted RBP19.54■□□□□ 0.72
CCDC43-205ENST00000592333 HLA-BQ31612 363 aa19.54■□□□□ 0.72
CCDC43-205ENST00000592333 TTC39BQ5VTQ0 682 aaPredicted RBP19.54■□□□□ 0.72
CCDC43-205ENST00000592333 PPP1R9BQ96SB3 815 aa19.54■□□□□ 0.72
CCDC43-205ENST00000592333 CDC6Q99741 560 aa19.54■□□□□ 0.72
CCDC43-205ENST00000592333 C6orf106Q9H6K1 298 aaPredicted RBP19.54■□□□□ 0.72
CCDC43-205ENST00000592333 TM7SF3Q9NS93 570 aa19.54■□□□□ 0.72
CCDC43-205ENST00000592333 ASNSD1Q9NWL6 643 aa19.54■□□□□ 0.72
CCDC43-205ENST00000592333 SLC12A6Q9UHW9 1150 aa19.54■□□□□ 0.72
CCDC43-205ENST00000592333 RWDD2AQ9UIY3 292 aa19.54■□□□□ 0.72
CCDC43-205ENST00000592333 PCOLCE2Q9UKZ9 415 aa19.54■□□□□ 0.72
CCDC43-205ENST00000592333 ASPMQ8IZT6 3477 aa19.54■□□□□ 0.72
CCDC43-205ENST00000592333 ITIH6Q6UXX5 1313 aa19.53■□□□□ 0.72
CCDC43-205ENST00000592333 PAPSS1O43252 624 aaPredicted RBP19.53■□□□□ 0.72
CCDC43-205ENST00000592333 GNA15P30679 374 aa19.53■□□□□ 0.72
CCDC43-205ENST00000592333 CSKP41240 450 aa19.53■□□□□ 0.72
CCDC43-205ENST00000592333 OXCT1P55809 520 aa19.53■□□□□ 0.72
CCDC43-205ENST00000592333 STX17P56962 302 aa19.53■□□□□ 0.72
CCDC43-205ENST00000592333 SNX16P57768 344 aa19.53■□□□□ 0.72
CCDC43-205ENST00000592333 RPS24P62847 133 aaKnown RBP19.53■□□□□ 0.72
CCDC43-205ENST00000592333 TRIM65Q6PJ69 517 aa19.53■□□□□ 0.72
CCDC43-205ENST00000592333 TAC4Q86UU9 113 aa19.53■□□□□ 0.72
CCDC43-205ENST00000592333 FAM124AQ86V42 546 aa19.53■□□□□ 0.72
CCDC43-205ENST00000592333 MRGPRX3Q96LB0 322 aa19.53■□□□□ 0.72
CCDC43-205ENST00000592333 PABPC3Q9H361 631 aaKnown RBP19.53■□□□□ 0.72
CCDC43-205ENST00000592333 TMEM51Q9NW97 253 aa19.53■□□□□ 0.72
CCDC43-205ENST00000592333 STIM2Q9P246 746 aa19.53■□□□□ 0.72
CCDC43-205ENST00000592333 TJP2Q9UDY2 1190 aa19.53■□□□□ 0.72
CCDC43-205ENST00000592333 INTS6Q9UL03 887 aaKnown RBP19.53■□□□□ 0.72
CCDC43-205ENST00000592333 FZD4Q9ULV1 537 aa19.53■□□□□ 0.72
CCDC43-205ENST00000592333 CFAP47Q6ZTR5 3102 aa19.53■□□□□ 0.72
CCDC43-205ENST00000592333 BIN1O00499 593 aa19.52■□□□□ 0.72
CCDC43-205ENST00000592333 LETM1O95202 739 aaPredicted RBP19.52■□□□□ 0.72
CCDC43-205ENST00000592333 TRUB2O95900 331 aaKnown RBP19.52■□□□□ 0.72
CCDC43-205ENST00000592333 FTH1P19P0C7X4 201 aa19.52■□□□□ 0.72
CCDC43-205ENST00000592333 VASPP50552 380 aaPredicted RBP19.52■□□□□ 0.72
CCDC43-205ENST00000592333 BNC1Q01954 994 aa19.52■□□□□ 0.72
CCDC43-205ENST00000592333 SULT2A1Q06520 285 aa19.52■□□□□ 0.72
CCDC43-205ENST00000592333 DCAF6Q58WW2 860 aa19.52■□□□□ 0.72
CCDC43-205ENST00000592333 SYPL2Q5VXT5 272 aa19.52■□□□□ 0.72
CCDC43-205ENST00000592333 DENND1BQ6P3S1 775 aa19.52■□□□□ 0.72
CCDC43-205ENST00000592333 CARNMT1Q8N4J0 409 aa19.52■□□□□ 0.72
CCDC43-205ENST00000592333 ZNF366Q8N895 744 aa19.52■□□□□ 0.72
CCDC43-205ENST00000592333 ATP6V0D2Q8N8Y2 350 aa19.52■□□□□ 0.72
CCDC43-205ENST00000592333 BIRC7Q96CA5 298 aa19.52■□□□□ 0.72
CCDC43-205ENST00000592333 NUCKS1Q9H1E3 243 aaKnown RBP19.52■□□□□ 0.72
CCDC43-205ENST00000592333 KIAA1468Q9P260 1216 aa19.52■□□□□ 0.72
CCDC43-205ENST00000592333 APEX2Q9UBZ4 518 aa19.52■□□□□ 0.72
CCDC43-205ENST00000592333 ADAMTS1Q9UHI8 967 aa19.52■□□□□ 0.72
CCDC43-205ENST00000592333 KLK13Q9UKR3 277 aa19.52■□□□□ 0.72
CCDC43-205ENST00000592333 PCDHGC3Q9UN70 934 aa19.52■□□□□ 0.72
CCDC43-205ENST00000592333 ERVW-1Q9UQF0 538 aa19.52■□□□□ 0.72
CCDC43-205ENST00000592333 IGF2RP11717 2491 aa19.51■□□□□ 0.71
CCDC43-205ENST00000592333 EDDM13A0A1B0GTR0 161 aa19.51■□□□□ 0.71
CCDC43-205ENST00000592333 KCNU1A8MYU2 1149 aa19.51■□□□□ 0.71
CCDC43-205ENST00000592333 E5RJQ4 531 aa19.51■□□□□ 0.71
CCDC43-205ENST00000592333 THAP12O43422 761 aa19.51■□□□□ 0.71
CCDC43-205ENST00000592333 PCDHGA12O60330 932 aa19.51■□□□□ 0.71
CCDC43-205ENST00000592333 PLK1P53350 603 aa19.51■□□□□ 0.71
CCDC43-205ENST00000592333 ECT2LQ008S8 904 aa19.51■□□□□ 0.71
CCDC43-205ENST00000592333 PITRM1Q5JRX3 1037 aa19.51■□□□□ 0.71
CCDC43-205ENST00000592333 EFHC1Q5JVL4 640 aa19.51■□□□□ 0.71
CCDC43-205ENST00000592333 GBP6Q6ZN66 633 aa19.51■□□□□ 0.71
CCDC43-205ENST00000592333 CACUL1Q86Y37 369 aa19.51■□□□□ 0.71
CCDC43-205ENST00000592333 BAHD1Q8TBE0 780 aaPredicted RBP19.51■□□□□ 0.71
CCDC43-205ENST00000592333 SHC3Q92529 594 aa19.51■□□□□ 0.71
CCDC43-205ENST00000592333 IGSF8Q969P0 613 aa19.51■□□□□ 0.71
CCDC43-205ENST00000592333 SKA1Q96BD8 255 aa19.51■□□□□ 0.71
CCDC43-205ENST00000592333 CAMK1GQ96NX5 476 aa19.51■□□□□ 0.71
CCDC43-205ENST00000592333 TM9SF3Q9HD45 589 aa19.51■□□□□ 0.71
CCDC43-205ENST00000592333 F5H5T6 163 aa19.5■□□□□ 0.71
CCDC43-205ENST00000592333 CALCAP01258 141 aa19.5■□□□□ 0.71
CCDC43-205ENST00000592333 TACR2P21452 398 aa19.5■□□□□ 0.71
CCDC43-205ENST00000592333 CCR1P32246 355 aa19.5■□□□□ 0.71
CCDC43-205ENST00000592333 NNMTP40261 264 aa19.5■□□□□ 0.71
CCDC43-205ENST00000592333 CSNK1EP49674 416 aaKnown RBP19.5■□□□□ 0.71
CCDC43-205ENST00000592333 RACK1P63244 317 aaKnown RBP19.5■□□□□ 0.71
CCDC43-205ENST00000592333 CDK17Q00537 523 aa19.5■□□□□ 0.71
CCDC43-205ENST00000592333 PDCLQ13371 301 aa19.5■□□□□ 0.71
CCDC43-205ENST00000592333 ZC3H12AQ5D1E8 599 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms