RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 SMG1Q96Q15 3661 aaKnown RBP9.52□□□□□ -0.89
APOC1-207ENST00000592176 RAB20Q9NX57 234 aa9.52□□□□□ -0.89
APOC1-207ENST00000592176 HESX1Q9UBX0 185 aa9.52□□□□□ -0.89
APOC1-207ENST00000592176 SERGEFQ9UGK8 458 aa9.52□□□□□ -0.89
APOC1-207ENST00000592176 APC2O95996 2303 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 ACACAQ13085 2346 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 ASXL3Q9C0F0 2248 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 TBC1D3DA0A087WVF3 549 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 TBC1D3IA0A087WXS9 549 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 TBC1D3EA0A087X179 549 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 TBC1D3KA0A087X1G2 549 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 TEX51A0A1B0GUA7 166 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 TARSL2A2RTX5 802 aaKnown RBP9.51□□□□□ -0.89
APOC1-207ENST00000592176 TBC1D3FA6NER0 549 aaPredicted RBP9.51□□□□□ -0.89
APOC1-207ENST00000592176 TBC1D3LB9A6J9 549 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 WNT9AO14904 365 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 IRAK2O43187 625 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 MSI1O43347 362 aaKnown RBP9.51□□□□□ -0.89
APOC1-207ENST00000592176 ACTN4O43707 911 aaKnown RBP9.51□□□□□ -0.89
APOC1-207ENST00000592176 ACSL4O60488 711 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 STX10O60499 249 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 MYL1P05976 194 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 TBC1D3HP0C7X1 549 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 LCP1P13796 627 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 GOT1P17174 413 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 CKMT2P17540 419 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 GLDCP23378 1020 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 ACTN2P35609 894 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 CSKP41240 450 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 RXRGP48443 463 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 ADIGQ0VDE8 80 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 BST2Q10589 180 aaKnown RBP9.51□□□□□ -0.89
APOC1-207ENST00000592176 KCNJ12Q14500 433 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 SGO2Q562F6 1265 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 C9orf64Q5T6V5 341 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 ATL3Q6DD88 541 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 TBC1D3GQ6DHY5 549 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 TBC1D3CQ6IPX1 549 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 SND1Q7KZF4 910 aaKnown RBP eCLIP9.51□□□□□ -0.895e-25■■■■□ 21
APOC1-207ENST00000592176 MFN1Q8IWA4 741 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 TBC1D3Q8IZP1 549 aaPredicted RBP9.51□□□□□ -0.89
APOC1-207ENST00000592176 CACTIN-AS1Q8N1I8 211 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 ZNF843Q8N446 348 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 CARNMT1Q8N4J0 409 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 KDM1BQ8NB78 822 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 FBXL13Q8NEE6 735 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 OR14C36Q8NHC7 312 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 SNIP1Q8TAD8 396 aaKnown RBP9.51□□□□□ -0.89
APOC1-207ENST00000592176 KCTD13Q8WZ19 329 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 AZIN2Q96A70 460 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 MYO19Q96H55 970 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 LMLNQ96KR4 655 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 MRGPRX3Q96LB0 322 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 FAM129BQ96TA1 746 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 DDX50Q9BQ39 737 aaKnown RBP9.51□□□□□ -0.89
APOC1-207ENST00000592176 ERVMER34-1Q9H9K5 563 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 ADAMTS1Q9UHI8 967 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 USP25Q9UHP3 1055 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 RCOR1Q9UKL0 485 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 TSPAN16Q9UKR8 245 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 CFAP45Q9UL16 551 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 FZD4Q9ULV1 537 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 TPX2Q9ULW0 747 aaKnown RBP9.51□□□□□ -0.89
APOC1-207ENST00000592176 ERVW-1Q9UQF0 538 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 MAPK8IP1Q9UQF2 711 aa9.51□□□□□ -0.89
APOC1-207ENST00000592176 TYW5A2RUC4 315 aaKnown RBP9.5□□□□□ -0.89
APOC1-207ENST00000592176 CAPN8A6NHC0 703 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 TTC34A8MYJ7 566 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 K7ELQ4 463 aaPredicted RBP9.5□□□□□ -0.89
APOC1-207ENST00000592176 BRINP1O60477 761 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 MAGEC1O60732 1142 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 MOCS3O95396 460 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 SRPRAP08240 638 aaKnown RBP9.5□□□□□ -0.89
APOC1-207ENST00000592176 ZSCAN22P10073 491 aaPredicted RBP9.5□□□□□ -0.89
APOC1-207ENST00000592176 VDRP11473 427 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 PLA2G2AP14555 144 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 CD19P15391 556 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 C5AR1P21730 350 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 EPHA8P29322 1005 aaPredicted RBP9.5□□□□□ -0.89
APOC1-207ENST00000592176 SLC6A4P31645 630 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 TBX4P57082 545 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 NXPH1P58417 271 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 DAOAP59103 153 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 MCCD1P59942 119 aaPredicted RBP9.5□□□□□ -0.89
APOC1-207ENST00000592176 E2F1Q01094 437 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 CFHR1Q03591 330 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 CCDC173Q0VFZ6 552 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 ARID5BQ14865 1188 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 FAM133BQ5BKY9 247 aaKnown RBP9.5□□□□□ -0.89
APOC1-207ENST00000592176 NUGGCQ68CJ6 796 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 MSANTD2Q6P1R3 559 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.5□□□□□ -0.89
APOC1-207ENST00000592176 PRPF39Q86UA1 669 aaKnown RBP9.5□□□□□ -0.89
APOC1-207ENST00000592176 SCML4Q8N228 414 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 OXR1Q8N573 874 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 MFSD2AQ8NA29 543 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 CNGB3Q9NQW8 809 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 SLCO3A1Q9UIG8 710 aa9.5□□□□□ -0.89
APOC1-207ENST00000592176 INTS6Q9UL03 887 aaKnown RBP9.5□□□□□ -0.89
APOC1-207ENST00000592176 KIAA1257Q9ULG3 409 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms