RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 PTPN3P26045 913 aa26.77■■□□□ 1.88
RUNDC3A-206ENST00000590941 PKN2Q16513 984 aaKnown RBP26.77■■□□□ 1.88
RUNDC3A-206ENST00000590941 DDR2Q16832 855 aa26.77■■□□□ 1.88
RUNDC3A-206ENST00000590941 GKAP1Q5VSY0 366 aaPredicted RBP26.77■■□□□ 1.88
RUNDC3A-206ENST00000590941 NUGGCQ68CJ6 796 aa26.77■■□□□ 1.88
RUNDC3A-206ENST00000590941 CNKSR3Q6P9H4 555 aa26.77■■□□□ 1.88
RUNDC3A-206ENST00000590941 CCDC33Q8N5R6 958 aa26.77■■□□□ 1.88
RUNDC3A-206ENST00000590941 TSGA13Q96PP4 275 aa26.77■■□□□ 1.88
RUNDC3A-206ENST00000590941 SDR42E2A6NKP2 422 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 KCNU1A8MYU2 1149 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 GATMP50440 423 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 IL9RQ01113 521 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 FAAP100Q0VG06 881 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 IKBKEQ14164 716 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 SLC26A11Q86WA9 606 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 NPWQ8N729 165 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 ANKRD42Q8N9B4 389 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 LRRN4Q8WUT4 740 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 CKAP2Q8WWK9 683 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 SCLYQ96I15 445 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 CRISPLD2Q9H0B8 497 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 GBA3Q9H227 469 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 TTLL3Q9Y4R7 772 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 PCDHA11Q9Y5I1 949 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 FNDC1Q4ZHG4 1894 aaPredicted RBP26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 AVILO75366 819 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 AMHP03971 560 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 HAPLN1P10915 354 aaPredicted RBP26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 DRD4P21917 467 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 PSMB4P28070 264 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 RWDD4Q6NW29 188 aaKnown RBP26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 LRRC6Q86X45 466 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 FBXO32Q969P5 355 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 STAMBPL1Q96FJ0 436 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 CDK5RAP1Q96SZ6 601 aaKnown RBP26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 RABEP2Q9H5N1 569 aa26.76■■□□□ 1.87
RUNDC3A-206ENST00000590941 WASH4PA8MWX3 477 aa26.75■■□□□ 1.87
RUNDC3A-206ENST00000590941 SUN1O94901 812 aa26.75■■□□□ 1.87
RUNDC3A-206ENST00000590941 ZWINTO95229 277 aa26.75■■□□□ 1.87
RUNDC3A-206ENST00000590941 CCNCP24863 283 aa26.75■■□□□ 1.87
RUNDC3A-206ENST00000590941 DNAJB2P25686 324 aa26.75■■□□□ 1.87
RUNDC3A-206ENST00000590941 ALDH7A1P49419 539 aaKnown RBP26.75■■□□□ 1.87
RUNDC3A-206ENST00000590941 NAB1Q13506 487 aa26.75■■□□□ 1.87
RUNDC3A-206ENST00000590941 PRPSAP1Q14558 356 aa26.75■■□□□ 1.87
RUNDC3A-206ENST00000590941 KBTBD12Q3ZCT8 623 aa26.75■■□□□ 1.87
RUNDC3A-206ENST00000590941 SYCP2LQ5T4T6 812 aa26.75■■□□□ 1.87
RUNDC3A-206ENST00000590941 ZNF449Q6P9G9 518 aa26.75■■□□□ 1.87
RUNDC3A-206ENST00000590941 ATP6V0D2Q8N8Y2 350 aa26.75■■□□□ 1.87
RUNDC3A-206ENST00000590941 SLC39A13Q96H72 371 aa26.75■■□□□ 1.87
RUNDC3A-206ENST00000590941 FCRL2Q96LA5 508 aaPredicted RBP26.75■■□□□ 1.87
RUNDC3A-206ENST00000590941 PGLYRP2Q96PD5 576 aa26.75■■□□□ 1.87
RUNDC3A-206ENST00000590941 SFMBT1Q9UHJ3 866 aa26.75■■□□□ 1.87
RUNDC3A-206ENST00000590941 MAD1L1Q9Y6D9 718 aa26.75■■□□□ 1.87
RUNDC3A-206ENST00000590941 CREB1P16220 341 aa26.74■■□□□ 1.87
RUNDC3A-206ENST00000590941 KPNA1P52294 538 aaPredicted RBP26.74■■□□□ 1.87
RUNDC3A-206ENST00000590941 CCL23P55773 120 aa26.74■■□□□ 1.87
RUNDC3A-206ENST00000590941 TBX4P57082 545 aa26.74■■□□□ 1.87
RUNDC3A-206ENST00000590941 TEX44Q53QW1 395 aa26.74■■□□□ 1.87
RUNDC3A-206ENST00000590941 STEAP4Q687X5 459 aa26.74■■□□□ 1.87
RUNDC3A-206ENST00000590941 TIGD7Q6NT04 549 aaPredicted RBP26.74■■□□□ 1.87
RUNDC3A-206ENST00000590941 FOXR1Q6PIV2 292 aa26.74■■□□□ 1.87
RUNDC3A-206ENST00000590941 CACNA2D3Q8IZS8 1091 aa26.74■■□□□ 1.87
RUNDC3A-206ENST00000590941 PDCD7Q8N8D1 485 aaKnown RBP26.74■■□□□ 1.87
RUNDC3A-206ENST00000590941 ATAD1Q8NBU5 361 aa26.74■■□□□ 1.87
RUNDC3A-206ENST00000590941 MAGEB18Q96M61 343 aa26.74■■□□□ 1.87
RUNDC3A-206ENST00000590941 SIK2Q9H0K1 926 aa26.74■■□□□ 1.87
RUNDC3A-206ENST00000590941 GMIPQ9P107 970 aa26.74■■□□□ 1.87
RUNDC3A-206ENST00000590941 NEU3Q9UQ49 428 aa26.74■■□□□ 1.87
RUNDC3A-206ENST00000590941 BACE2Q9Y5Z0 518 aa26.74■■□□□ 1.87
RUNDC3A-206ENST00000590941 MICAL3Q7RTP6 2002 aa26.74■■□□□ 1.87
RUNDC3A-206ENST00000590941 ZNF638Q14966 1978 aaKnown RBP26.74■■□□□ 1.87
RUNDC3A-206ENST00000590941 FAM155BO75949 473 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 KRT37O76014 449 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 AP2A1O95782 977 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 ATN1P54259 1190 aaPredicted RBP26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 TLE2Q04725 743 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 SPARCL1Q14515 664 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 EFTUD2Q15029 972 aaKnown RBP eCLIP26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 TCTN1Q2MV58 587 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 USP41Q3LFD5 358 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 MGAT5BQ3V5L5 792 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 RTP2Q5QGT7 225 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 TTC39BQ5VTQ0 682 aaPredicted RBP26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 UNC5AQ6ZN44 842 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 TAX1BP1Q86VP1 789 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 AGGF1Q8N302 714 aaeCLIP26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 PPP1R12CQ9BZL4 782 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 SRGAP2BP0DMP2 458 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 PGAM1P18669 254 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 SERPINB9P50453 376 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 ARPP19P56211 112 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 HTRA3P83110 453 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 TRIP4Q15650 581 aaPredicted RBP26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 ATPAF2Q8N5M1 289 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 MGARPQ8TDB4 240 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 MZB1Q8WU39 189 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 MTBPQ96DY7 904 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 SAMD15Q9P1V8 674 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 HSFX1Q9UBD0 423 aa26.73■■□□□ 1.87
RUNDC3A-206ENST00000590941 SNX10Q9Y5X0 201 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms