RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 RALBP11234 206 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 LMO2P25791 158 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ABCE1P61221 599 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 BTKQ06187 659 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CDC16Q13042 620 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 RALGPS1Q5JS13 557 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 MARCH8Q5T0T0 291 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 THEMIS2Q5TEJ8 643 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 C9orf57Q5W0N0 161 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 RASSF3Q86WH2 238 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ISL2Q96A47 359 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CERS2Q96G23 380 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 TRAPPC9Q96Q05 1148 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CPNE1Q99829 537 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CEP41Q9BYV8 373 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PDP2Q9P2J9 529 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SF3B1O75533 1304 aaKnown RBP eCLIP14.56□□□□□ -0.081e-11■■■■■ 43.1
CDK5RAP3-237ENST00000585163 H3BRB1 525 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 LYNP07948 512 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 MX2P20592 715 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 MAGEA12P43365 314 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PDK1Q15118 436 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 GLRA4Q5JXX5 417 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 GRTP1Q5TC63 336 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 FOXB2Q5VYV0 432 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SLC30A9Q6PML9 568 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ZNF567Q8N184 647 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 NETO2Q8NC67 525 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ACTRT2Q8TDY3 377 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 RNF139Q8WU17 664 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PGBD4Q96DM1 585 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CMTM5Q96DZ9 223 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 TUT1Q9H6E5 874 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 IL1RAPL1Q9NZN1 696 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 IGSF9Q9P2J2 1179 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 RPS6KL1Q9Y6S9 549 aa14.56□□□□□ -0.08
CDK5RAP3-237ENST00000585163 EME2A4GXA9 379 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ADCY6O43306 1168 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 GNL1P36915 607 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 MLH1P40692 756 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 IREB2P48200 963 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SULT1E1P49888 294 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ITGA9Q13797 1035 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CCDC153Q494R4 210 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SPANXN3Q5MJ09 141 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PDPK2PQ6A1A2 396 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SLC27A1Q6PCB7 646 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ALKAL1Q6UXT8 129 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 DEFB106AQ8N104 65 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SLC2A14Q8TDB8 520 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 EMID1Q96A84 441 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PRDM12Q9H4Q4 367 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PIDD1Q9HB75 910 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PAPOLBQ9NRJ5 636 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SNX15Q9NRS6 342 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 GJD2Q9UKL4 321 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 KCNH4Q9UQ05 1017 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 UBTFL6P0CB48 400 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CPA3P15088 417 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 GARSP41250 739 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CDK7P50613 346 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 DEUP1Q05D60 604 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 HNRNPDQ14103 355 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 FBXO47Q5MNV8 452 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 VWA5B1Q5TIE3 1220 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 OTUD1Q5VV17 481 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CES3Q6UWW8 571 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 RAPH1Q70E73 1250 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 DHDDSQ86SQ9 333 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 RSPH3Q86UC2 560 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CCNYQ8ND76 341 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 EIF2AQ9BY44 585 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ZNF358Q9NW07 568 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SEPT10Q9P0V9 454 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CDH22Q9UJ99 828 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 HES2Q9Y543 173 aa14.55□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ADM5C9JUS6 153 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 GNAT1P11488 350 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PAPOLAP51003 745 aaKnown RBP14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SMAD1Q15797 465 aaKnown RBP14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 GRIK4Q16099 956 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 KIZQ2M2Z5 673 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 RNF111Q6ZNA4 994 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 BNIPLQ7Z465 357 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CMC1Q7Z7K0 106 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PYDC1Q8WXC3 89 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PPP2R3CQ969Q6 453 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 NT5C3BQ969T7 300 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 FCRL3Q96P31 734 aaPredicted RBP14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 RBBP8Q99708 897 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 TMPRSS4Q9NRS4 437 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ZDHHC7Q9NXF8 308 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ADAM28Q9UKQ2 775 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PCDHB12Q9Y5F1 795 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PIRO00625 290 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 GMPRP36959 345 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 EPHB1P54762 984 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 IFRD2Q12894 506 aaPredicted RBP14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CCNIQ14094 377 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PAFAH1B3Q15102 231 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms