RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 YWHAGP61981 247 aaKnown RBP eCLIP11.63□□□□□ -0.55
CCDC47-206ENST00000584112 PDE4CQ08493 712 aa11.63□□□□□ -0.55
CCDC47-206ENST00000584112 EFEMP1Q12805 493 aa11.63□□□□□ -0.55
CCDC47-206ENST00000584112 EMC10Q5UCC4 262 aa11.63□□□□□ -0.55
CCDC47-206ENST00000584112 PM20D1Q6GTS8 502 aa11.63□□□□□ -0.55
CCDC47-206ENST00000584112 SDE2Q6IQ49 451 aa11.63□□□□□ -0.55
CCDC47-206ENST00000584112 TTI2Q6NXR4 508 aa11.63□□□□□ -0.55
CCDC47-206ENST00000584112 TRIML1Q8N9V2 468 aa11.63□□□□□ -0.55
CCDC47-206ENST00000584112 NELFBQ8WX92 580 aa11.63□□□□□ -0.55
CCDC47-206ENST00000584112 IPO9Q96P70 1041 aaKnown RBP11.63□□□□□ -0.55
CCDC47-206ENST00000584112 LRRC4Q9HBW1 653 aa11.63□□□□□ -0.55
CCDC47-206ENST00000584112 MARCH2Q9P0N8 246 aa11.63□□□□□ -0.55
CCDC47-206ENST00000584112 TP53BP1Q12888 1972 aaPredicted RBP11.62□□□□□ -0.55
CCDC47-206ENST00000584112 TCRBV21S2A2A0A5A6 115 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 PPP1R3GB7ZBB8 358 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 KLK10O43240 276 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 ADAM23O75077 832 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 FGFR1OPO95684 399 aaKnown RBP11.62□□□□□ -0.55
CCDC47-206ENST00000584112 CYBBP04839 570 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 HOXB2P14652 356 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 ITGB6P18564 788 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 GRNP28799 593 aaKnown RBP11.62□□□□□ -0.55
CCDC47-206ENST00000584112 NTSR1P30989 418 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 CORO1AP31146 461 aaKnown RBP11.62□□□□□ -0.55
CCDC47-206ENST00000584112 HNF1BP35680 557 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 DGKGP49619 791 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 BNC1Q01954 994 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 PAK1Q13153 545 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 MORC3Q14149 939 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 E2F5Q15329 346 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 STILQ15468 1287 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 TMEM270Q6UE05 265 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 RGL4Q8IZJ4 473 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 SIX6OS1Q8N1H7 587 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 PGBD3Q8N328 593 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 PPM1KQ8N3J5 372 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 UBR7Q8N806 425 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 ZNF248Q8NDW4 579 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 SNRNP27Q8WVK2 155 aaKnown RBP11.62□□□□□ -0.55
CCDC47-206ENST00000584112 PLD4Q96BZ4 506 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 ULBP1Q9BZM6 244 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 CTNND2Q9UQB3 1225 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 PCDHB4Q9Y5E5 795 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 ABCA2Q9BZC7 2435 aa11.62□□□□□ -0.55
CCDC47-206ENST00000584112 TMEM131Q92545 1883 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 SLC12A8A0AV02 714 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 O00370 1275 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 BIN1O00499 593 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 TRIM24O15164 1050 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 FLRT2O43155 660 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 GADD45BO75293 160 aaPredicted RBP11.61□□□□□ -0.55
CCDC47-206ENST00000584112 ITGB2P05107 769 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 HMBSP08397 361 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 BMP6P22004 513 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 MARSP56192 900 aaKnown RBP11.61□□□□□ -0.55
CCDC47-206ENST00000584112 ADIGQ0VDE8 80 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 LCLAT1Q6UWP7 414 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 DBX2Q6ZNG2 339 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 CHPFQ8IZ52 775 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 SCML4Q8N228 414 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 CPXM2Q8N436 756 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 RNF139Q8WU17 664 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 KCTD13Q8WZ19 329 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 BHMTQ93088 406 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 POM121Q96HA1 1249 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 ZDHHC4Q9NPG8 344 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 CNGB3Q9NQW8 809 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 ABCC13Q9NSE7 274 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 SLC27A6Q9Y2P4 619 aa11.61□□□□□ -0.55
CCDC47-206ENST00000584112 HBS1LQ9Y450 684 aaKnown RBP11.61□□□□□ -0.55
CCDC47-206ENST00000584112 MED13LQ71F56 2210 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 PRRT4C9JH25 899 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 TULP2O00295 520 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 GFRA2O00451 464 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 NPC1O15118 1278 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 PENKP01210 267 aaPredicted RBP11.6□□□□□ -0.55
CCDC47-206ENST00000584112 KLKB1P03952 638 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 CISD3P0C7P0 127 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 HARS2P49590 506 aaKnown RBP11.6□□□□□ -0.55
CCDC47-206ENST00000584112 ZNF445P59923 1031 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 GCNT1Q02742 428 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 CNGA2Q16280 664 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 LINC00303Q3SY05 128 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 HES3Q5TGS1 186 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 EGFLAMQ63HQ2 1017 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 SLC36A4Q6YBV0 504 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 DENND1CQ8IV53 801 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 TRIM59Q8IWR1 403 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 SPDYE1Q8NFV5 336 aaPredicted RBP11.6□□□□□ -0.55
CCDC47-206ENST00000584112 UBA3Q8TBC4 463 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 UCMAQ8WVF2 138 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 IRGQQ8WZA9 623 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 PLK2Q9NYY3 685 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 FBXO10Q9UK96 956 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 AGO1Q9UL18 857 aaKnown RBP11.6□□□□□ -0.55
CCDC47-206ENST00000584112 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.6□□□□□ -0.55
CCDC47-206ENST00000584112 SVILO95425 2214 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 AKAP9Q99996 3911 aa11.6□□□□□ -0.55
CCDC47-206ENST00000584112 NUMA1Q14980 2115 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 M0QYV0 167 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms