RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 C3orf20Q8ND61 904 aa13.71□□□□□ -0.21
NUP85-215ENST00000580879 FIBINQ8TAL6 211 aa13.71□□□□□ -0.21
NUP85-215ENST00000580879 WFIKKN2Q8TEU8 576 aa13.71□□□□□ -0.21
NUP85-215ENST00000580879 UCMAQ8WVF2 138 aa13.71□□□□□ -0.21
NUP85-215ENST00000580879 GAB3Q8WWW8 586 aa13.71□□□□□ -0.21
NUP85-215ENST00000580879 PGAP3Q96FM1 320 aaPredicted RBP13.71□□□□□ -0.21
NUP85-215ENST00000580879 LMLNQ96KR4 655 aa13.71□□□□□ -0.21
NUP85-215ENST00000580879 RPRD1AQ96P16 312 aaPredicted RBP13.71□□□□□ -0.21
NUP85-215ENST00000580879 GABRG3Q99928 467 aa13.71□□□□□ -0.21
NUP85-215ENST00000580879 NUP58Q9BVL2 599 aa13.71□□□□□ -0.21
NUP85-215ENST00000580879 SELENOOQ9BVL4 669 aa13.71□□□□□ -0.21
NUP85-215ENST00000580879 IRX2Q9BZI1 471 aaPredicted RBP13.71□□□□□ -0.21
NUP85-215ENST00000580879 SLC6A17Q9H1V8 727 aa13.71□□□□□ -0.21
NUP85-215ENST00000580879 ARHGEF38Q9NXL2 777 aa13.71□□□□□ -0.21
NUP85-215ENST00000580879 THAP10Q9P2Z0 257 aaPredicted RBP13.71□□□□□ -0.21
NUP85-215ENST00000580879 A0A1W2PQJ5 194 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 C2CD4BA6NLJ0 364 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 DDX3XO00571 662 aaKnown RBP eCLIP13.7□□□□□ -0.22
NUP85-215ENST00000580879 ATMINO43313 823 aaPredicted RBP13.7□□□□□ -0.22
NUP85-215ENST00000580879 F9P00740 461 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 GYPCP04921 128 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 HLA-EP13747 358 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 GABRG2P18507 467 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 RRM1P23921 792 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 PRKCHP24723 683 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 SDC4P31431 198 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 CNR2P34972 360 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 PRKCIP41743 596 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 EIF4HQ15056 248 aaKnown RBP13.7□□□□□ -0.22
NUP85-215ENST00000580879 FNDC3BQ53EP0 1204 aaKnown RBP13.7□□□□□ -0.22
NUP85-215ENST00000580879 TDRD12Q587J7 1177 aaKnown RBP13.7□□□□□ -0.22
NUP85-215ENST00000580879 BRMS1LQ5PSV4 323 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 RABGAP1LQ5R372 815 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 WDR59Q6PJI9 974 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 ARCQ7LC44 396 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 BNIPLQ7Z465 357 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 KIAA0907Q7Z7F0 614 aaPredicted RBP13.7□□□□□ -0.22
NUP85-215ENST00000580879 KBTBD6Q86V97 674 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 AHI1Q8N157 1196 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 CCAR2Q8N163 923 aaKnown RBP13.7□□□□□ -0.22
NUP85-215ENST00000580879 ZNF366Q8N895 744 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 RLN3Q8WXF3 142 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 MCEEQ96PE7 176 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 CD248Q9HCU0 757 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 NCDNQ9UBB6 729 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 INTS6Q9UL03 887 aaKnown RBP13.7□□□□□ -0.22
NUP85-215ENST00000580879 RAB23Q9ULC3 237 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 CAPN11Q9UMQ6 739 aa13.7□□□□□ -0.22
NUP85-215ENST00000580879 TCRBV5S1A1TA0A578 114 aa13.69□□□□□ -0.22
NUP85-215ENST00000580879 SIGLEC16A6NMB1 481 aa13.69□□□□□ -0.22
NUP85-215ENST00000580879 TIMM44O43615 452 aa13.69□□□□□ -0.22
NUP85-215ENST00000580879 TPM3P06753 285 aa13.69□□□□□ -0.22
NUP85-215ENST00000580879 PLEKP08567 350 aaPredicted RBP13.69□□□□□ -0.22
NUP85-215ENST00000580879 POLR2EP19388 210 aaKnown RBP13.69□□□□□ -0.22
NUP85-215ENST00000580879 GPD1P21695 349 aa13.69□□□□□ -0.22
NUP85-215ENST00000580879 CASP14P31944 242 aa13.69□□□□□ -0.22
NUP85-215ENST00000580879 CSKP41240 450 aa13.69□□□□□ -0.22
NUP85-215ENST00000580879 GSCP56915 257 aaPredicted RBP13.69□□□□□ -0.22
NUP85-215ENST00000580879 RPL7AP62424 266 aaKnown RBP13.69□□□□□ -0.22
NUP85-215ENST00000580879 ZBED6P86452 979 aa13.69□□□□□ -0.22
NUP85-215ENST00000580879 USP39Q53GS9 565 aaKnown RBP13.69□□□□□ -0.22
NUP85-215ENST00000580879 PITRM1Q5JRX3 1037 aa13.69□□□□□ -0.22
NUP85-215ENST00000580879 HGSNATQ68CP4 663 aa13.69□□□□□ -0.22
NUP85-215ENST00000580879 SERPINA13PQ6UXR4 307 aa13.69□□□□□ -0.22
NUP85-215ENST00000580879 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.69□□□□□ -0.22
NUP85-215ENST00000580879 APCDD1Q8J025 514 aa13.69□□□□□ -0.22
NUP85-215ENST00000580879 FAM160A2Q8N612 972 aaPredicted RBP13.69□□□□□ -0.22
NUP85-215ENST00000580879 FRMD1Q8N878 549 aa13.69□□□□□ -0.22
NUP85-215ENST00000580879 FAM172AQ8WUF8 416 aa13.69□□□□□ -0.22
NUP85-215ENST00000580879 RUBCNQ92622 972 aa13.69□□□□□ -0.22
NUP85-215ENST00000580879 LUC7L2Q9Y383 392 aaKnown RBP13.69□□□□□ -0.22
NUP85-215ENST00000580879 PAXBP1Q9Y5B6 917 aa13.69□□□□□ -0.22
NUP85-215ENST00000580879 CFAP54Q96N23 3096 aa13.69□□□□□ -0.22
NUP85-215ENST00000580879 ZNF292O60281 2723 aa13.69□□□□□ -0.22
NUP85-215ENST00000580879 A0A1B0GVM2 712 aa13.68□□□□□ -0.22
NUP85-215ENST00000580879 TCAF2A6NFQ2 919 aa13.68□□□□□ -0.22
NUP85-215ENST00000580879 CCP110O43303 1012 aa13.68□□□□□ -0.22
NUP85-215ENST00000580879 CBFA2T2O43439 604 aa13.68□□□□□ -0.22
NUP85-215ENST00000580879 CNTN5O94779 1100 aa13.68□□□□□ -0.22
NUP85-215ENST00000580879 ENDOD1O94919 500 aa13.68□□□□□ -0.22
NUP85-215ENST00000580879 FTLP02792 175 aaPredicted RBP13.68□□□□□ -0.22
NUP85-215ENST00000580879 EPHX1P07099 455 aa13.68□□□□□ -0.22
NUP85-215ENST00000580879 DLDP09622 509 aaKnown RBP13.68□□□□□ -0.22
NUP85-215ENST00000580879 NDUFV2P19404 249 aa13.68□□□□□ -0.22
NUP85-215ENST00000580879 BCKDHBP21953 392 aa13.68□□□□□ -0.22
NUP85-215ENST00000580879 MZF1P28698 734 aaPredicted RBP13.68□□□□□ -0.22
NUP85-215ENST00000580879 CTSOP43234 321 aaPredicted RBP13.68□□□□□ -0.22
NUP85-215ENST00000580879 PTPN9P43378 593 aa13.68□□□□□ -0.22
NUP85-215ENST00000580879 HDAC4P56524 1084 aa13.68□□□□□ -0.22
NUP85-215ENST00000580879 ENPP2Q13822 863 aa13.68□□□□□ -0.22
NUP85-215ENST00000580879 STARD3Q14849 445 aa13.68□□□□□ -0.22
NUP85-215ENST00000580879 PTPRNQ16849 979 aa13.68□□□□□ -0.22
NUP85-215ENST00000580879 TTC39BQ5VTQ0 682 aaPredicted RBP13.68□□□□□ -0.22
NUP85-215ENST00000580879 DCUN1D2Q6PH85 259 aa13.68□□□□□ -0.22
NUP85-215ENST00000580879 CACUL1Q86Y37 369 aa13.68□□□□□ -0.22
NUP85-215ENST00000580879 ZNF683Q8IZ20 524 aa13.68□□□□□ -0.22
NUP85-215ENST00000580879 ZNF557Q8N988 423 aaPredicted RBP13.68□□□□□ -0.22
NUP85-215ENST00000580879 OR52K2Q8NGK3 314 aa13.68□□□□□ -0.22
NUP85-215ENST00000580879 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.68□□□□□ -0.22
NUP85-215ENST00000580879 GMEB2Q9UKD1 530 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms