RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 PIK3R2O00459 728 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 KCNK3O14649 394 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 FLRT2O43155 660 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 TBL1XO60907 577 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 FBXO21O94952 628 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 SEMA4FO95754 770 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 SLC6A4P31645 630 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 CD70P32970 193 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 TBX4P57082 545 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 RPS14P62263 151 aaKnown RBP13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 TYRO3Q06418 890 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 CETN1Q12798 172 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 SUZ12Q15022 739 aaKnown RBP13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 TEAD4Q15561 434 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 STX1AQ16623 288 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 SLCO6A1Q86UG4 719 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 BAHD1Q8TBE0 780 aaPredicted RBP13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 MDM1Q8TC05 714 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 WFDC5Q8TCV5 224 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 TTC17Q96AE7 1141 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 BIRC7Q96CA5 298 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 LMLNQ96KR4 655 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 CDC6Q99741 560 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 DDX50Q9BQ39 737 aaKnown RBP13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 SGK2Q9HBY8 427 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 ANO10Q9NW15 660 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 STIM2Q9P246 746 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 SCML1Q9UN30 329 aa13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 FNDC3AQ9Y2H6 1198 aaKnown RBP13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 ANKRD11Q6UB99 2663 aaPredicted RBP13.04□□□□□ -0.32
SMARCD2-207ENST00000578234 PLXNB3Q9ULL4 1909 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 PTPRBP23467 1997 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 SYCE3A1L190 88 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 TYW5A2RUC4 315 aaKnown RBP13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 M0QYV0 167 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 TAF4O00268 1085 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 ASLP04424 464 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 FYNP06241 537 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 BRD2P25440 801 aaKnown RBP13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 GRIA4P48058 902 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 RPL34P49207 117 aaKnown RBP13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 GCNT1Q02742 428 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 NNTQ13423 1086 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 ARID5BQ14865 1188 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 KIF19Q2TAC6 998 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 TTC31Q49AM3 519 aaPredicted RBP13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 ZNF776Q68DI1 518 aaPredicted RBP13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 NADSYN1Q6IA69 706 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 FOXR2Q6PJQ5 311 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 CCNI2Q6ZMN8 369 aaPredicted RBP13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 USP30Q70CQ3 517 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 PROSER1Q86XN7 944 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 MARCH9Q86YJ5 346 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 MFN1Q8IWA4 741 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 SCUBE3Q8IX30 993 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 KDM1BQ8NB78 822 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 CLEC4CQ8WTT0 213 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 KAT5Q92993 513 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 MYO19Q96H55 970 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 RSPH9Q9H1X1 276 aaPredicted RBP13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 TM9SF3Q9HD45 589 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 TLR6Q9Y2C9 796 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 SLCO1B1Q9Y6L6 691 aa13.03□□□□□ -0.32
SMARCD2-207ENST00000578234 SART1O43290 800 aaKnown RBP13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 FGFR1OPO95684 399 aaKnown RBP13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 ATXN1LP0C7T5 689 aaKnown RBP13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 CD27P26842 260 aa13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 ERCC5P28715 1186 aaPredicted RBP13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 GPD2P43304 727 aa13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 ST8SIA6P61647 398 aa13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 IL9RQ01113 521 aa13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 COL28A1Q2UY09 1125 aa13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 SKOR2Q2VWA4 1001 aaPredicted RBP13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 HNRNPA1L2Q32P51 320 aaKnown RBP13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 BEND5Q7L4P6 421 aa13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 CCDC117Q8IWD4 279 aaPredicted RBP13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 HJURPQ8NCD3 748 aaPredicted RBP13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 EHBP1Q8NDI1 1231 aa13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 IGSF8Q969P0 613 aa13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 SLC39A13Q96H72 371 aa13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 FCRL2Q96LA5 508 aaPredicted RBP13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 PRICKLE1Q96MT3 831 aaPredicted RBP13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 SERPINB11Q96P15 392 aa13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 MIS12Q9H081 205 aa13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 INTS6Q9UL03 887 aaKnown RBP13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 CNTN6Q9UQ52 1028 aa13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 NCKAP1Q9Y2A7 1128 aa13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 ANKRD6Q9Y2G4 727 aa13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 CEP83Q9Y592 693 aa13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 SNX11Q9Y5W9 270 aa13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 NBEAQ8NFP9 2946 aa13.02□□□□□ -0.33
SMARCD2-207ENST00000578234 URB1O60287 2271 aaKnown RBP13.01□□□□□ -0.33
SMARCD2-207ENST00000578234 ACACAQ13085 2346 aa13.01□□□□□ -0.33
SMARCD2-207ENST00000578234 FAM149AA5PLN7 773 aa13.01□□□□□ -0.33
SMARCD2-207ENST00000578234 PCDHGA12O60330 932 aa13.01□□□□□ -0.33
SMARCD2-207ENST00000578234 RNASEH1O60930 286 aaKnown RBP13.01□□□□□ -0.33
SMARCD2-207ENST00000578234 DKK1O94907 266 aa13.01□□□□□ -0.33
SMARCD2-207ENST00000578234 GNA14O95837 355 aa13.01□□□□□ -0.33
SMARCD2-207ENST00000578234 CSKP41240 450 aa13.01□□□□□ -0.33
SMARCD2-207ENST00000578234 ACADSBP45954 432 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms