RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 FER1L6Q2WGJ9 1857 aa11.03□□□□□ -0.64
CCDC40-207ENST00000572253 A0A087WZ62 844 aa11.03□□□□□ -0.64
CCDC40-207ENST00000572253 MPOP05164 745 aa11.03□□□□□ -0.64
CCDC40-207ENST00000572253 FOLH1Q04609 750 aa11.03□□□□□ -0.64
CCDC40-207ENST00000572253 DLG1Q12959 904 aa11.03□□□□□ -0.64
CCDC40-207ENST00000572253 CNGA3Q16281 694 aa11.03□□□□□ -0.64
CCDC40-207ENST00000572253 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.03□□□□□ -0.64
CCDC40-207ENST00000572253 HSP90AA5PQ58FG0 334 aa11.03□□□□□ -0.64
CCDC40-207ENST00000572253 PPM1JQ5JR12 505 aa11.03□□□□□ -0.64
CCDC40-207ENST00000572253 NCBP2-AS2Q69YL0 99 aa11.03□□□□□ -0.64
CCDC40-207ENST00000572253 FRMD7Q6ZUT3 714 aa11.03□□□□□ -0.64
CCDC40-207ENST00000572253 SLC26A9Q7LBE3 791 aa11.03□□□□□ -0.64
CCDC40-207ENST00000572253 OPTNQ96CV9 577 aa11.03□□□□□ -0.64
CCDC40-207ENST00000572253 CPB2Q96IY4 423 aa11.03□□□□□ -0.64
CCDC40-207ENST00000572253 NDNQ99608 321 aa11.03□□□□□ -0.64
CCDC40-207ENST00000572253 FDXACB1Q9BRP7 624 aaPredicted RBP11.03□□□□□ -0.64
CCDC40-207ENST00000572253 LRRC40Q9H9A6 602 aa11.03□□□□□ -0.64
CCDC40-207ENST00000572253 COG4Q9H9E3 785 aa11.03□□□□□ -0.64
CCDC40-207ENST00000572253 SYBUQ9NX95 663 aa11.03□□□□□ -0.64
CCDC40-207ENST00000572253 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.03□□□□□ -0.64
CCDC40-207ENST00000572253 BFARQ9NZS9 450 aa11.03□□□□□ -0.64
CCDC40-207ENST00000572253 RCOR3Q9P2K3 495 aaPredicted RBP11.03□□□□□ -0.64
CCDC40-207ENST00000572253 PPP1R1BQ9UD71 204 aaPredicted RBP11.03□□□□□ -0.64
CCDC40-207ENST00000572253 PARP14Q460N5 1801 aa11.03□□□□□ -0.64
CCDC40-207ENST00000572253 CASQ2O14958 399 aaPredicted RBP11.02□□□□□ -0.64
CCDC40-207ENST00000572253 ERVK-10P10266 1014 aa11.02□□□□□ -0.64
CCDC40-207ENST00000572253 MTTPP55157 894 aa11.02□□□□□ -0.64
CCDC40-207ENST00000572253 POU5F1BQ06416 359 aa11.02□□□□□ -0.64
CCDC40-207ENST00000572253 SMAD1Q15797 465 aaKnown RBP11.02□□□□□ -0.64
CCDC40-207ENST00000572253 ZNF484Q5JVG2 852 aa11.02□□□□□ -0.64
CCDC40-207ENST00000572253 ZFP1Q6P2D0 407 aa11.02□□□□□ -0.64
CCDC40-207ENST00000572253 PDZD4Q76G19 769 aaPredicted RBP11.02□□□□□ -0.64
CCDC40-207ENST00000572253 MAVSQ7Z434 540 aa11.02□□□□□ -0.64
CCDC40-207ENST00000572253 PQLC1Q8N2U9 271 aa11.02□□□□□ -0.64
CCDC40-207ENST00000572253 CXorf38Q8TB03 319 aa11.02□□□□□ -0.64
CCDC40-207ENST00000572253 SLC35F5Q8WV83 523 aa11.02□□□□□ -0.64
CCDC40-207ENST00000572253 B3GNT5Q9BYG0 378 aa11.02□□□□□ -0.64
CCDC40-207ENST00000572253 ILKAPQ9H0C8 392 aaPredicted RBP11.02□□□□□ -0.64
CCDC40-207ENST00000572253 FZD1Q9UP38 647 aa11.02□□□□□ -0.64
CCDC40-207ENST00000572253 INPP5FQ9Y2H2 1132 aa11.02□□□□□ -0.64
CCDC40-207ENST00000572253 AIM2O14862 343 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 TRIM13O60858 407 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 MLH1P40692 756 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 ACADSBP45954 432 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 NUDT2P50583 147 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 INHBEP58166 350 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 MSLNQ13421 630 aaPredicted RBP11.02□□□□□ -0.65
CCDC40-207ENST00000572253 R3HDM1Q15032 1099 aaKnown RBP11.02□□□□□ -0.65
CCDC40-207ENST00000572253 SPATA24Q86W54 205 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 PHTF2Q8N3S3 785 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 DCLK2Q8N568 766 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 TDRD5Q8NAT2 981 aaKnown RBP11.02□□□□□ -0.65
CCDC40-207ENST00000572253 ZNF669Q96BR6 464 aaPredicted RBP11.02□□□□□ -0.65
CCDC40-207ENST00000572253 LGMNQ99538 433 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 PIH1D1Q9NWS0 290 aaKnown RBP11.02□□□□□ -0.65
CCDC40-207ENST00000572253 PSAT1Q9Y617 370 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 C15orf38-AP3S2A0A0A6YYH1 394 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.02□□□□□ -0.65
CCDC40-207ENST00000572253 E2F8A0AVK6 867 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 CCDC160A6NGH7 325 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 ZMPSTE24O75844 475 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 DGKIO75912 1065 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 APOA4P06727 396 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 LCP1P13796 627 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 GOT1P17174 413 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 PSMB4P28070 264 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 SCNN1AP37088 669 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 BST2Q10589 180 aaKnown RBP11.02□□□□□ -0.65
CCDC40-207ENST00000572253 GRM2Q14416 872 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 EPGNQ6UW88 154 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 BNC2Q6ZN30 1099 aaPredicted RBP11.02□□□□□ -0.65
CCDC40-207ENST00000572253 PID1Q7Z2X4 250 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 ARPINQ7Z6K5 226 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 STRA8Q7Z7C7 330 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 KYQ8NBH2 561 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 SPATC1LQ9H0A9 340 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 ERAP1Q9NZ08 941 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 PIM2Q9P1W9 311 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 KLHL8Q9P2G9 620 aaPredicted RBP11.02□□□□□ -0.65
CCDC40-207ENST00000572253 STK39Q9UEW8 545 aa11.02□□□□□ -0.65
CCDC40-207ENST00000572253 ARIH2O95376 493 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 PIM1P11309 404 aaPredicted RBP11.01□□□□□ -0.65
CCDC40-207ENST00000572253 VAV1P15498 845 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 RGS2P41220 211 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 BCAT1P54687 386 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 USP4Q13107 963 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 STRADAQ7RTN6 431 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 KBTBD6Q86V97 674 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 EFCAB3Q8N7B9 438 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 DNAAF3Q8N9W5 541 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.01□□□□□ -0.65
CCDC40-207ENST00000572253 KLRG1Q96E93 195 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 HIC2Q96JB3 615 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 GCNAQ96QF7 691 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 MRPL45Q9BRJ2 306 aaKnown RBP11.01□□□□□ -0.65
CCDC40-207ENST00000572253 ADORA2BP29275 332 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 SERPINB5P36952 375 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 LSAMPQ13449 338 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 FLOT2Q14254 428 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 PKDCCQ504Y2 493 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms