RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 E2F4Q16254 413 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 PROX2Q3B8N5 592 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 KMT5BQ4FZB7 885 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 PPP1R26Q5T8A7 1209 aaPredicted RBP11.79□□□□□ -0.52
CHMP6-202ENST00000571457 NAPEPLDQ6IQ20 393 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 SND1Q7KZF4 910 aaKnown RBP eCLIP11.79□□□□□ -0.52
CHMP6-202ENST00000571457 KANSL1Q7Z3B3 1105 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 SLC9A9Q8IVB4 645 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 ZC3H3Q8IXZ2 948 aaKnown RBP11.79□□□□□ -0.52
CHMP6-202ENST00000571457 TTC39CQ8N584 583 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 CCDC150Q8NCX0 1101 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 TMEM174Q8WUU8 243 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 TTC17Q96AE7 1141 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 HEXIM2Q96MH2 286 aaKnown RBP11.79□□□□□ -0.52
CHMP6-202ENST00000571457 DEPDC7Q96QD5 511 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 BACH2Q9BYV9 841 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 SEMA4CQ9C0C4 833 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 NIF3L1Q9GZT8 377 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 MAGEF1Q9HAY2 307 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 THSD1Q9NS62 852 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 SERGEFQ9UGK8 458 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 COL12A1Q99715 3063 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 PVALEFA0A1B0GWK0 134 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 TARSL2A2RTX5 802 aaKnown RBP11.78□□□□□ -0.52
CHMP6-202ENST00000571457 C10orf142B7Z368 130 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 WNT9AO14904 365 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 LATO43561 262 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 SIGLEC6O43699 453 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 MPOP05164 745 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 CD70P32970 193 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 CSRP3P50461 194 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 GABREP78334 506 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 DLG4P78352 724 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 RAB41Q5JT25 222 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 PM20D1Q6GTS8 502 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 PRPF39Q86UA1 669 aaKnown RBP11.78□□□□□ -0.52
CHMP6-202ENST00000571457 PIGZQ86VD9 579 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 MMAAQ8IVH4 418 aaKnown RBP11.78□□□□□ -0.52
CHMP6-202ENST00000571457 CCDC117Q8IWD4 279 aaPredicted RBP11.78□□□□□ -0.52
CHMP6-202ENST00000571457 OR14C36Q8NHC7 312 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 TTC9Q92623 222 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 DHX58Q96C10 678 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 MTG2Q9H4K7 406 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 POLR1BQ9H9Y6 1135 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 SLC39A2Q9NP94 309 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 DMAC2Q9NW81 257 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 DMTF1Q9Y222 760 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 FRMD4BQ9Y2L6 1034 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 NOTCH2Q04721 2471 aa11.78□□□□□ -0.52
CHMP6-202ENST00000571457 BOD1L1Q8NFC6 3051 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 TBC1D3DA0A087WVF3 549 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 TBC1D3IA0A087WXS9 549 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 TBC1D3EA0A087X179 549 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 TBC1D3KA0A087X1G2 549 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 EDDM13A0A1B0GTR0 161 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 TYW5A2RUC4 315 aaKnown RBP11.77□□□□□ -0.53
CHMP6-202ENST00000571457 TBC1D3FA6NER0 549 aaPredicted RBP11.77□□□□□ -0.53
CHMP6-202ENST00000571457 TBC1D3LB9A6J9 549 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 TBL1XO60907 577 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 USP12O75317 370 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 CD2BP2O95400 341 aaKnown RBP11.77□□□□□ -0.53
CHMP6-202ENST00000571457 TBC1D3HP0C7X1 549 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 C5AR1P21730 350 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 CSKP41240 450 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 SLC11A2P49281 568 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 TKTL1P51854 596 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 ADPRHP54922 357 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 STAT4Q14765 748 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 STK38Q15208 465 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 C9orf64Q5T6V5 341 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 PIK3R6Q5UE93 754 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 TBC1D3GQ6DHY5 549 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 TBC1D3CQ6IPX1 549 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 FAM173BQ6P4H8 233 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 SPATS2Q86XZ4 545 aaKnown RBP11.77□□□□□ -0.53
CHMP6-202ENST00000571457 MFN1Q8IWA4 741 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 TBC1D3Q8IZP1 549 aaPredicted RBP11.77□□□□□ -0.53
CHMP6-202ENST00000571457 FIBINQ8TAL6 211 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 CCDC97Q96F63 343 aaPredicted RBP11.77□□□□□ -0.53
CHMP6-202ENST00000571457 MYO19Q96H55 970 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 IPO9Q96P70 1041 aaKnown RBP11.77□□□□□ -0.53
CHMP6-202ENST00000571457 USP28Q96RU2 1077 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 ULBP1Q9BZM6 244 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 EVA1BQ9NVM1 165 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 PCDHB1Q9Y5F3 818 aa11.77□□□□□ -0.53
CHMP6-202ENST00000571457 DOPEY2Q9Y3R5 2298 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 MYO9AB2RTY4 2548 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.76□□□□□ -0.53
CHMP6-202ENST00000571457 PYCARD-AS1I3L0S3 204 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 TRIM38O00635 465 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 OPA1O60313 960 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 MOCS3O95396 460 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 SRPRAP08240 638 aaKnown RBP11.76□□□□□ -0.53
CHMP6-202ENST00000571457 PSMD8P48556 350 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 NASPP49321 788 aaPredicted RBP11.76□□□□□ -0.53
CHMP6-202ENST00000571457 ZNF394Q53GI3 561 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 CDCP2Q5VXM1 449 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 RNF219Q5W0B1 726 aaPredicted RBP11.76□□□□□ -0.53
CHMP6-202ENST00000571457 BSPRYQ5W0U4 402 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 NUGGCQ68CJ6 796 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms