RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 GDPD2Q9HCC8 539 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 SCUBE2Q9NQ36 999 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 AASDHPPTQ9NRN7 309 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 USP25Q9UHP3 1055 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 XPO7Q9UIA9 1087 aaKnown RBP12.54□□□□□ -0.4
CAPN3-220ENST00000569827 STOML2Q9UJZ1 356 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 A0A1B0GTQ1 180 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 M0QYV0 167 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 PCDHGA12O60330 932 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 ACSL4O60488 711 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 RNASEH2AO75792 299 aaKnown RBP12.53□□□□□ -0.4
CAPN3-220ENST00000569827 VAV1P15498 845 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 METAP1P53582 386 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 PMS1P54277 932 aaKnown RBP12.53□□□□□ -0.4
CAPN3-220ENST00000569827 GALCP54803 685 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 TBX4P57082 545 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 SEMG2Q02383 582 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 PNOCQ13519 176 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 SMAD1Q15797 465 aaKnown RBP12.53□□□□□ -0.4
CAPN3-220ENST00000569827 CST6Q15828 149 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 ATL3Q6DD88 541 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 EID2Q8N6I1 236 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 UBR7Q8N806 425 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 CNDP2Q96KP4 475 aaKnown RBP12.53□□□□□ -0.4
CAPN3-220ENST00000569827 LMLNQ96KR4 655 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 MRGPRX3Q96LB0 322 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 ACE2Q9BYF1 805 aaPredicted RBP12.53□□□□□ -0.4
CAPN3-220ENST00000569827 MIS12Q9H081 205 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 NEUROG2Q9H2A3 272 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 SGK2Q9HBY8 427 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 ABCC13Q9NSE7 274 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 DKK4Q9UBT3 224 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 ZDHHC9Q9Y397 364 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 CFAP46Q8IYW2 2715 aa12.53□□□□□ -0.4
CAPN3-220ENST00000569827 A0A1W2PPC4 97 aa12.52□□□□□ -0.41
CAPN3-220ENST00000569827 EIF4E1BA6NMX2 242 aaKnown RBP12.52□□□□□ -0.41
CAPN3-220ENST00000569827 RNF225M0QZC1 329 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-220ENST00000569827 ENC1O14682 589 aa12.52□□□□□ -0.41
CAPN3-220ENST00000569827 TLX3O43711 291 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-220ENST00000569827 IGLV3-27P01718 113 aa12.52□□□□□ -0.41
CAPN3-220ENST00000569827 MYL1P05976 194 aa12.52□□□□□ -0.41
CAPN3-220ENST00000569827 ATP5BP06576 529 aaKnown RBP12.52□□□□□ -0.41
CAPN3-220ENST00000569827 PRCPP42785 496 aa12.52□□□□□ -0.41
CAPN3-220ENST00000569827 STK19P49842 368 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-220ENST00000569827 PPP2CBP62714 309 aa12.52□□□□□ -0.41
CAPN3-220ENST00000569827 RACK1P63244 317 aaKnown RBP12.52□□□□□ -0.41
CAPN3-220ENST00000569827 PPP2CAP67775 309 aa12.52□□□□□ -0.41
CAPN3-220ENST00000569827 BNIP3Q12983 259 aa12.52□□□□□ -0.41
CAPN3-220ENST00000569827 PKDCCQ504Y2 493 aa12.52□□□□□ -0.41
CAPN3-220ENST00000569827 MSANTD2Q6P1R3 559 aa12.52□□□□□ -0.41
CAPN3-220ENST00000569827 TMEM270Q6UE05 265 aa12.52□□□□□ -0.41
CAPN3-220ENST00000569827 CIR1Q86X95 450 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-220ENST00000569827 STK40Q8N2I9 435 aa12.52□□□□□ -0.41
CAPN3-220ENST00000569827 AADATQ8N5Z0 425 aa12.52□□□□□ -0.41
CAPN3-220ENST00000569827 PDCD7Q8N8D1 485 aaKnown RBP12.52□□□□□ -0.41
CAPN3-220ENST00000569827 HJURPQ8NCD3 748 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-220ENST00000569827 RPL10LQ96L21 214 aaKnown RBP12.52□□□□□ -0.41
CAPN3-220ENST00000569827 FCRL2Q96LA5 508 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-220ENST00000569827 OSGEPQ9NPF4 335 aa12.52□□□□□ -0.41
CAPN3-220ENST00000569827 SUN2Q9UH99 717 aa12.52□□□□□ -0.41
CAPN3-220ENST00000569827 SLCO3A1Q9UIG8 710 aa12.52□□□□□ -0.41
CAPN3-220ENST00000569827 NCKAP1Q9Y2A7 1128 aa12.52□□□□□ -0.41
CAPN3-220ENST00000569827 RP1P56715 2156 aa12.52□□□□□ -0.41
CAPN3-220ENST00000569827 DOCK4Q8N1I0 1966 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 CETN3O15182 167 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 VILLO15195 856 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 SDC3O75056 442 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 LDOC1O95751 146 aaPredicted RBP12.51□□□□□ -0.41
CAPN3-220ENST00000569827 LATS1O95835 1130 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 LTFP02788 710 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 ITGAVP06756 1048 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 SETSIPP0DME0 302 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 VDRP11473 427 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 JUPP14923 745 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 ABCB4P21439 1286 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 ABCG1P45844 678 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 SLC11A2P49281 568 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 ZNF445P59923 1031 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 ST8SIA6P61647 398 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 ZBTB16Q05516 673 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 CDH18Q13634 790 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 E2F5Q15329 346 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 HNRNPA1L2Q32P51 320 aaKnown RBP12.51□□□□□ -0.41
CAPN3-220ENST00000569827 EDRF1Q3B7T1 1238 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 POM121L1PQ3SYA9 428 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 PITRM1Q5JRX3 1037 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 C9orf64Q5T6V5 341 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 HES3Q5TGS1 186 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 APCDD1Q8J025 514 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 TTC39CQ8N584 583 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 DQX1Q8TE96 717 aaKnown RBP12.51□□□□□ -0.41
CAPN3-220ENST00000569827 KCTD13Q8WZ19 329 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 ELF4Q99607 663 aaPredicted RBP12.51□□□□□ -0.41
CAPN3-220ENST00000569827 OMDQ99983 421 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 FBRSQ9HAH7 460 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 CNGB3Q9NQW8 809 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 ERVW-1Q9UQF0 538 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 NAALADL1Q9UQQ1 740 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 CA5BQ9Y2D0 317 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 CEP83Q9Y592 693 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms