RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 ZNF597Q96LX8 424 aa5.6□□□□□ -1.51
LINC01541-202ENST00000568095 KCNK16Q96T55 309 aa5.6□□□□□ -1.51
LINC01541-202ENST00000568095 PCYT2Q99447 389 aa5.6□□□□□ -1.51
LINC01541-202ENST00000568095 PRPF18Q99633 342 aaKnown RBP5.6□□□□□ -1.51
LINC01541-202ENST00000568095 TEKT3Q9BXF9 490 aa5.6□□□□□ -1.51
LINC01541-202ENST00000568095 MROH8Q9H579 483 aa5.6□□□□□ -1.51
LINC01541-202ENST00000568095 FAM96AQ9H5X1 160 aa5.6□□□□□ -1.51
LINC01541-202ENST00000568095 PALMDQ9NP74 551 aa5.6□□□□□ -1.51
LINC01541-202ENST00000568095 VPS45Q9NRW7 570 aa5.6□□□□□ -1.51
LINC01541-202ENST00000568095 TBC1D22BQ9NU19 505 aa5.6□□□□□ -1.51
LINC01541-202ENST00000568095 TUBA8Q9NY65 449 aaPredicted RBP5.6□□□□□ -1.51
LINC01541-202ENST00000568095 DDX56Q9NY93 547 aaKnown RBP5.6□□□□□ -1.51
LINC01541-202ENST00000568095 RRN3Q9NYV6 651 aa5.6□□□□□ -1.51
LINC01541-202ENST00000568095 CCL15-CCL14A0A0B4J2E2 113 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 H3BNH8 94 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 K7ENM7 598 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 TXNDC9O14530 226 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 HOXA2O43364 376 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 SNRPAP09012 282 aaKnown RBP5.59□□□□□ -1.51
LINC01541-202ENST00000568095 FGF3P11487 239 aaPredicted RBP5.59□□□□□ -1.51
LINC01541-202ENST00000568095 HOXD8P13378 290 aaPredicted RBP5.59□□□□□ -1.51
LINC01541-202ENST00000568095 GABRB3P28472 473 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 ELK3P41970 407 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 MAGEA6P43360 314 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 NSFP46459 744 aaKnown RBP5.59□□□□□ -1.51
LINC01541-202ENST00000568095 ENTPD1P49961 510 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 IDH3AP50213 366 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 CNGA3Q16281 694 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 CCL15Q16663 113 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 FAM110CQ1W6H9 321 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 MORN1Q5T089 497 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 RARS2Q5T160 578 aaKnown RBP5.59□□□□□ -1.51
LINC01541-202ENST00000568095 ASTLQ6HA08 431 aaPredicted RBP5.59□□□□□ -1.51
LINC01541-202ENST00000568095 TMEM53Q6P2H8 277 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 DCDC5Q6ZRR9 648 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 FRMD7Q6ZUT3 714 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 DENND5BQ6ZUT9 1274 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 GPR180Q86V85 440 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 NUDCD3Q8IVD9 361 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 C4orf19Q8IY42 314 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 TSPAN14Q8NG11 270 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 DEPTORQ8TB45 409 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 HM13Q8TCT9 377 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 TAS1R2Q8TE23 839 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 CHPT1Q8WUD6 406 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 SNX27Q96L92 541 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 PPP1R10Q96QC0 940 aaKnown RBP5.59□□□□□ -1.51
LINC01541-202ENST00000568095 SORT1Q99523 831 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 LXNQ9BS40 222 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 TDRD1Q9BXT4 1180 aaKnown RBP5.59□□□□□ -1.51
LINC01541-202ENST00000568095 XAB2Q9HCS7 855 aaKnown RBP5.59□□□□□ -1.51
LINC01541-202ENST00000568095 PARVAQ9NVD7 372 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 HESX1Q9UBX0 185 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 VTI1BQ9UEU0 232 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 TRIM49D1C9J1S8 452 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 KBTBD13C9JR72 458 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 GOLGA8SH3BPF8 625 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 GOLGA8MH3BSY2 632 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 SGK1O00141 431 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 TLR3O15455 904 aaKnown RBP5.59□□□□□ -1.51
LINC01541-202ENST00000568095 GAS7O60861 476 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 SULT1C4O75897 302 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 BAIAP3O94812 1187 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 FARP2O94887 1054 aaPredicted RBP5.59□□□□□ -1.51
LINC01541-202ENST00000568095 ARIH2O95376 493 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 H6PDO95479 791 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 CALCAP01258 141 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 PDGFRBP09619 1106 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 PROZP22891 400 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 PPARGP37231 505 aaPredicted RBP5.59□□□□□ -1.51
LINC01541-202ENST00000568095 CTBSQ01459 385 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 STX3Q13277 289 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 SNRNP35Q16560 246 aaKnown RBP5.59□□□□□ -1.51
LINC01541-202ENST00000568095 ZNF829Q3KNS6 432 aaPredicted RBP5.59□□□□□ -1.51
LINC01541-202ENST00000568095 GRAMD1BQ3KR37 738 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 PIGGQ5H8A4 983 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 ARHGEF16Q5VV41 709 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 AMIGO2Q86SJ2 522 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 ADGRF2Q8IZF7 708 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 DEFB107AQ8IZN7 70 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 PDIK1LQ8N165 341 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 TTC30BQ8N4P2 665 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 POU5F2Q8N7G0 328 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 PPP4R1Q8TF05 950 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 GIPC3Q8TF64 312 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 PRPF31Q8WWY3 499 aaKnown RBP5.59□□□□□ -1.51
LINC01541-202ENST00000568095 HSPH1Q92598 858 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 EMID1Q96A84 441 aaPredicted RBP5.59□□□□□ -1.51
LINC01541-202ENST00000568095 TMIGD2Q96BF3 282 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 LRGUKQ96M69 825 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 CGREF1Q99674 301 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 SMYD3Q9H7B4 428 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 ARHGAP28Q9P2N2 729 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 APPL1Q9UKG1 709 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 PCDHGC3Q9UN70 934 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 BOLA1Q9Y3E2 137 aa5.59□□□□□ -1.51
LINC01541-202ENST00000568095 SCN10AQ9Y5Y9 1956 aa5.59□□□□□ -1.52
LINC01541-202ENST00000568095 A0A1B0GTW7 788 aa5.59□□□□□ -1.52
LINC01541-202ENST00000568095 MYOCOSA0A1B0GUC4 107 aa5.59□□□□□ -1.52
LINC01541-202ENST00000568095 PI4K2BG5E9Z4 385 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms