RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 MCUQ8NE86 351 aa11.14□□□□□ -0.63
PDXDC1-214ENST00000566633 SLC7A14Q8TBB6 771 aa11.14□□□□□ -0.63
PDXDC1-214ENST00000566633 CCDC110Q8TBZ0 833 aa11.14□□□□□ -0.63
PDXDC1-214ENST00000566633 KLF6Q99612 283 aaPredicted RBP11.14□□□□□ -0.63
PDXDC1-214ENST00000566633 CWH43Q9H720 699 aa11.14□□□□□ -0.63
PDXDC1-214ENST00000566633 CSNK1G1Q9HCP0 422 aa11.14□□□□□ -0.63
PDXDC1-214ENST00000566633 DMAP1Q9NPF5 467 aaPredicted RBP11.14□□□□□ -0.63
PDXDC1-214ENST00000566633 AP4E1Q9UPM8 1137 aa11.14□□□□□ -0.63
PDXDC1-214ENST00000566633 HOXA2O43364 376 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 AMHP03971 560 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 APRTP07741 180 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 CPB1P15086 417 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 ZFXP17010 805 aaPredicted RBP11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 SYN1P17600 705 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 SLC5A3P53794 718 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 KCNJ2P63252 427 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 SLC45A4Q5BKX6 768 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 RAB41Q5JT25 222 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 OTUD1Q5VV17 481 aaPredicted RBP11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 ASRGL1Q7L266 308 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 C16orf59Q7L2K0 433 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 CDKL3Q8IVW4 592 aaPredicted RBP11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 THOC1Q96FV9 657 aaKnown RBP11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 SERAC1Q96JX3 654 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 CSPG4P5Q96PW8 444 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 KCTD15Q96SI1 283 aaPredicted RBP11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 VN1R3Q9BXE9 311 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 MCOLN1Q9GZU1 580 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 ZCWPW1Q9H0M4 648 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 VPS11Q9H270 941 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 C12orf65Q9H3J6 166 aaKnown RBP11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 PLAC1Q9HBJ0 212 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 POPDC2Q9HBU9 364 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 SLC17A7Q9P2U7 560 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 MRPL42Q9Y6G3 142 aaKnown RBP11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 IKBKGQ9Y6K9 419 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 USH1CQ9Y6N9 552 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 SF3B1O75533 1304 aaKnown RBP eCLIP11.13□□□□□ -0.632e-6■■■■■ 43.1
PDXDC1-214ENST00000566633 CHUKO15111 745 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 PARNO95453 639 aaKnown RBP11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 METTL18O95568 372 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 INHBAP08476 426 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 CCNB1P14635 433 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 NQO1P15559 274 aaKnown RBP11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 WDR5P61964 334 aaKnown RBP11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 SLC18A2Q05940 514 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 SEPT7Q16181 437 aaKnown RBP11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 SWT1Q5T5J6 900 aaKnown RBP11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 RNF19BQ6ZMZ0 732 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 BHLHA9Q7RTU4 235 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 OTOAQ7RTW8 1153 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 CFAP36Q96G28 342 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 MRPL9Q9BYD2 267 aaKnown RBP11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 CD248Q9HCU0 757 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 ANLNQ9NQW6 1124 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 ARHGEF3Q9NR81 526 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 PIGVQ9NUD9 493 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 ZC3H7BQ9UGR2 993 aaKnown RBP11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 TTLL3Q9Y4R7 772 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 CDY1Q9Y6F8 540 aa11.13□□□□□ -0.63
PDXDC1-214ENST00000566633 TRDMT1O14717 391 aaKnown RBP11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 HGSO14964 777 aaPredicted RBP11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 SYN3O14994 580 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 FGFR3P22607 806 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 SKIV2L2P42285 1042 aaKnown RBP11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 MAGEA3P43357 314 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 USP46P62068 366 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 BTG3Q14201 252 aaPredicted RBP11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 BSPRYQ5W0U4 402 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 KCNT2Q6UVM3 1135 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 C4orf50Q6ZRC1 276 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 STRADAQ7RTN6 431 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 SLC26A11Q86WA9 606 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 MAGEC3Q8TD91 643 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 AUTS2Q8WXX7 1259 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 LRRC39Q96DD0 335 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 SEPT5Q99719 369 aaPredicted RBP11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 CNGB3Q9NQW8 809 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 CHKBQ9Y259 395 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 USP3Q9Y6I4 520 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 ARHGEF37A1IGU5 675 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 WDR91A4D1P6 747 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 I6L893 689 aaPredicted RBP11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 LPXNO60711 386 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 CAPN15O75808 1086 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 LTFP02788 710 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 DHRS4L1P0CG22 281 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 ALADP13716 330 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 PRKCHP24723 683 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 DNAJB2P25686 324 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 NOS2P35228 1153 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 ETV4P43268 484 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 NEK3P51956 506 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 DUSP4Q13115 394 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 RIPK1Q13546 671 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 MRPL58Q14197 206 aaKnown RBP11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 MAPRE1Q15691 268 aaKnown RBP11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 SLC25A52Q3SY17 297 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 MGAT5BQ3V5L5 792 aa11.12□□□□□ -0.63
PDXDC1-214ENST00000566633 ZNF280DQ6N043 979 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms