RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 MTIF2P46199 727 aaKnown RBP18.97■□□□□ 0.63
USB1-213ENST00000566292 FAM193AP78312 1265 aa18.97■□□□□ 0.63
USB1-213ENST00000566292 RAP1GAP2Q684P5 730 aa18.97■□□□□ 0.63
USB1-213ENST00000566292 PASD1Q8IV76 773 aa18.97■□□□□ 0.63
USB1-213ENST00000566292 LGI2Q8N0V4 545 aa18.97■□□□□ 0.63
USB1-213ENST00000566292 C1orf216Q8TAB5 229 aa18.97■□□□□ 0.63
USB1-213ENST00000566292 MRGPRX3Q96LB0 322 aa18.97■□□□□ 0.63
USB1-213ENST00000566292 CLSTN2Q9H4D0 955 aa18.97■□□□□ 0.63
USB1-213ENST00000566292 SUN2Q9UH99 717 aa18.97■□□□□ 0.63
USB1-213ENST00000566292 PCDHGC3Q9UN70 934 aa18.97■□□□□ 0.63
USB1-213ENST00000566292 SLCO1B1Q9Y6L6 691 aa18.97■□□□□ 0.63
USB1-213ENST00000566292 PLXNA2O75051 1894 aa18.97■□□□□ 0.63
USB1-213ENST00000566292 BCAT2O15382 392 aaPredicted RBP18.96■□□□□ 0.63
USB1-213ENST00000566292 TACR2P21452 398 aa18.96■□□□□ 0.63
USB1-213ENST00000566292 CTSOP43234 321 aaPredicted RBP18.96■□□□□ 0.63
USB1-213ENST00000566292 SIM1P81133 766 aaPredicted RBP18.96■□□□□ 0.63
USB1-213ENST00000566292 BNC1Q01954 994 aa18.96■□□□□ 0.63
USB1-213ENST00000566292 CDH18Q13634 790 aa18.96■□□□□ 0.63
USB1-213ENST00000566292 PITRM1Q5JRX3 1037 aa18.96■□□□□ 0.63
USB1-213ENST00000566292 CHSY1Q86X52 802 aa18.96■□□□□ 0.63
USB1-213ENST00000566292 BTN2A3PQ96KV6 586 aa18.96■□□□□ 0.63
USB1-213ENST00000566292 SLC2A13Q96QE2 648 aa18.96■□□□□ 0.63
USB1-213ENST00000566292 PCED1AQ9H1Q7 454 aa18.96■□□□□ 0.63
USB1-213ENST00000566292 IGF2RP11717 2491 aa18.95■□□□□ 0.62
USB1-213ENST00000566292 SIN3BO75182 1162 aa18.95■□□□□ 0.62
USB1-213ENST00000566292 DNTTP04053 509 aa18.95■□□□□ 0.62
USB1-213ENST00000566292 ASLP04424 464 aa18.95■□□□□ 0.62
USB1-213ENST00000566292 PNMA6AP0CW24 399 aaPredicted RBP18.95■□□□□ 0.62
USB1-213ENST00000566292 CLCN1P35523 988 aa18.95■□□□□ 0.62
USB1-213ENST00000566292 ZBTB16Q05516 673 aa18.95■□□□□ 0.62
USB1-213ENST00000566292 SLC14A1Q13336 389 aa18.95■□□□□ 0.62
USB1-213ENST00000566292 MAN2A1Q16706 1144 aa18.95■□□□□ 0.62
USB1-213ENST00000566292 TPD52L1Q16890 204 aaPredicted RBP18.95■□□□□ 0.62
USB1-213ENST00000566292 DPCR1Q3MIW9 517 aa18.95■□□□□ 0.62
USB1-213ENST00000566292 ZNF776Q68DI1 518 aaPredicted RBP18.95■□□□□ 0.62
USB1-213ENST00000566292 DPY19L2P1Q6NXN4 242 aa18.95■□□□□ 0.62
USB1-213ENST00000566292 DEFB106AQ8N104 65 aa18.95■□□□□ 0.62
USB1-213ENST00000566292 PPP1R13BQ96KQ4 1090 aa18.95■□□□□ 0.62
USB1-213ENST00000566292 CAMK1GQ96NX5 476 aa18.95■□□□□ 0.62
USB1-213ENST00000566292 PRMT1Q99873 361 aaKnown RBP18.95■□□□□ 0.62
USB1-213ENST00000566292 SCNM1Q9BWG6 230 aa18.95■□□□□ 0.62
USB1-213ENST00000566292 ZDHHC5Q9C0B5 715 aa18.95■□□□□ 0.62
USB1-213ENST00000566292 RSPH9Q9H1X1 276 aaPredicted RBP18.95■□□□□ 0.62
USB1-213ENST00000566292 ASNSD1Q9NWL6 643 aa18.95■□□□□ 0.62
USB1-213ENST00000566292 DNAJC12Q9UKB3 198 aa18.95■□□□□ 0.62
USB1-213ENST00000566292 ERVW-1Q9UQF0 538 aa18.95■□□□□ 0.62
USB1-213ENST00000566292 KCNU1A8MYU2 1149 aa18.94■□□□□ 0.62
USB1-213ENST00000566292 C1QTNF9BB2RNN3 333 aa18.94■□□□□ 0.62
USB1-213ENST00000566292 H0Y626 953 aa18.94■□□□□ 0.62
USB1-213ENST00000566292 FOXN3O00409 490 aaPredicted RBP18.94■□□□□ 0.62
USB1-213ENST00000566292 SH3BP5O60239 455 aa18.94■□□□□ 0.62
USB1-213ENST00000566292 GRAP2O75791 330 aa18.94■□□□□ 0.62
USB1-213ENST00000566292 SEMA4FO95754 770 aa18.94■□□□□ 0.62
USB1-213ENST00000566292 GLI1P08151 1106 aa18.94■□□□□ 0.62
USB1-213ENST00000566292 C1QTNF9P0C862 333 aa18.94■□□□□ 0.62
USB1-213ENST00000566292 ST8SIA6P61647 398 aa18.94■□□□□ 0.62
USB1-213ENST00000566292 PTK2Q05397 1052 aa18.94■□□□□ 0.62
USB1-213ENST00000566292 HNRNPA1L2Q32P51 320 aaKnown RBP18.94■□□□□ 0.62
USB1-213ENST00000566292 MIIPQ5JXC2 388 aa18.94■□□□□ 0.62
USB1-213ENST00000566292 FAM183BPQ6ZVS7 135 aa18.94■□□□□ 0.62
USB1-213ENST00000566292 CCDC117Q8IWD4 279 aaPredicted RBP18.94■□□□□ 0.62
USB1-213ENST00000566292 APCDD1Q8J025 514 aa18.94■□□□□ 0.62
USB1-213ENST00000566292 ATP6V0D2Q8N8Y2 350 aa18.94■□□□□ 0.62
USB1-213ENST00000566292 C1orf131Q8NDD1 294 aaKnown RBP18.94■□□□□ 0.62
USB1-213ENST00000566292 SNX19Q92543 992 aa18.94■□□□□ 0.62
USB1-213ENST00000566292 TMEM121BQ9BXQ6 578 aaPredicted RBP18.94■□□□□ 0.62
USB1-213ENST00000566292 BTBD1Q9H0C5 482 aa18.94■□□□□ 0.62
USB1-213ENST00000566292 FAM204AQ9H8W3 233 aa18.94■□□□□ 0.62
USB1-213ENST00000566292 IL21RQ9HBE5 538 aa18.94■□□□□ 0.62
USB1-213ENST00000566292 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.94■□□□□ 0.62
USB1-213ENST00000566292 KIAA1522Q9P206 1035 aaPredicted RBP18.94■□□□□ 0.62
USB1-213ENST00000566292 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.94■□□□□ 0.62
USB1-213ENST00000566292 ASPMQ8IZT6 3477 aa18.94■□□□□ 0.62
USB1-213ENST00000566292 CABIN1Q9Y6J0 2220 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 SYNJ2BP-COX16A0A087WUM0 186 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 TTC34A8MYJ7 566 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 HYAL3O43820 417 aaPredicted RBP18.93■□□□□ 0.62
USB1-213ENST00000566292 ERBB2P04626 1255 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 CDK17Q00537 523 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 ARID5BQ14865 1188 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 TTC31Q49AM3 519 aaPredicted RBP18.93■□□□□ 0.62
USB1-213ENST00000566292 PTPN20Q4JDL3 420 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 HSP90AA4PQ58FG1 418 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 EFHC1Q5JVL4 640 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 C9orf64Q5T6V5 341 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 SMYD5Q6GMV2 418 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 OLFML1Q6UWY5 402 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 SLC47A2Q86VL8 602 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 CIR1Q86X95 450 aaPredicted RBP18.93■□□□□ 0.62
USB1-213ENST00000566292 DHX40Q8IX18 779 aaKnown RBP18.93■□□□□ 0.62
USB1-213ENST00000566292 KDM1BQ8NB78 822 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 ADAM33Q9BZ11 813 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 NDST4Q9H3R1 872 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 PLCB1Q9NQ66 1216 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 DDIT4Q9NX09 232 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 COX16Q9P0S2 106 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 ITIH6Q6UXX5 1313 aa18.93■□□□□ 0.62
USB1-213ENST00000566292 F5H5T6 163 aa18.92■□□□□ 0.62
USB1-213ENST00000566292 HSF2BPO75031 334 aa18.92■□□□□ 0.62
USB1-213ENST00000566292 MOCS3O95396 460 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms