RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 LRRTM3Q86VH5 581 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 RALGPS2Q86X27 583 aaPredicted RBP6.51□□□□□ -1.37
UBFD1-204ENST00000565634 WDR49Q8IV35 697 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 FAM20CQ8IXL6 584 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 HDDC3Q8N4P3 179 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 CCDC33Q8N5R6 958 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 SHKBP1Q8TBC3 707 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 SPATA18Q8TC71 538 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 ADAMTS14Q8WXS8 1223 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 EZH1Q92800 747 aaPredicted RBP6.51□□□□□ -1.37
UBFD1-204ENST00000565634 HPDLQ96IR7 371 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 SENP8Q96LD8 212 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 TWNKQ96RR1 684 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 FNBP1Q96RU3 617 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 ZSWIM1Q9BR11 485 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 MRPL45Q9BRJ2 306 aaKnown RBP6.51□□□□□ -1.37
UBFD1-204ENST00000565634 PRORYQ9H606 182 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 TMEM8AQ9HCN3 771 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 UBN1Q9NPG3 1134 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 ZDHHC4Q9NPG8 344 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 TRPV5Q9NQA5 729 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 GKN1Q9NS71 199 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 TMLHEQ9NVH6 421 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 HMGXB4Q9UGU5 601 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 SALL4Q9UJQ4 1053 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 DERAQ9Y315 318 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 COQ4Q9Y3A0 265 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 C2CD2Q9Y426 696 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 ATMQ13315 3056 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 PCDH15Q96QU1 1955 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 TEX15Q9BXT5 2789 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 KPNA7A9QM74 516 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 H0Y626 953 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 FOXN3O00409 490 aaPredicted RBP6.5□□□□□ -1.37
UBFD1-204ENST00000565634 PES1O00541 588 aaKnown RBP6.5□□□□□ -1.37
UBFD1-204ENST00000565634 CYB561D2O14569 222 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 PAX4O43316 350 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 FBXO24O75426 580 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 KRT38O76015 456 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 TRIM16O95361 564 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 GNA14O95837 355 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 ASS1P00966 412 aaKnown RBP6.5□□□□□ -1.37
UBFD1-204ENST00000565634 TNNC2P02585 160 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 OR4Q2P0C623 313 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 TMEM191BP0C7N4 346 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 CYP3A5P20815 502 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 ACO1P21399 889 aaKnown RBP6.5□□□□□ -1.37
UBFD1-204ENST00000565634 ACAT1P24752 427 aaKnown RBP6.5□□□□□ -1.37
UBFD1-204ENST00000565634 EEF1GP26641 437 aaKnown RBP6.5□□□□□ -1.37
UBFD1-204ENST00000565634 IRAK1P51617 712 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 UBASH3AP57075 661 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 RBP5P82980 135 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 POU5F1Q01860 360 aaKnown RBP6.5□□□□□ -1.37
UBFD1-204ENST00000565634 UBXN1Q04323 297 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 TWF1Q12792 350 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 GRIK3Q13003 919 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 BIRC3Q13489 604 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 SYCP1Q15431 976 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 KYAT1Q16773 422 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 ZNF423Q2M1K9 1284 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 WDR72Q3MJ13 1102 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 KLHDC7AQ5VTJ3 777 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 E4F1Q66K89 784 aaPredicted RBP6.5□□□□□ -1.37
UBFD1-204ENST00000565634 HGSNATQ68CP4 663 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 KRT39Q6A163 491 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 HIST2H2BCQ6DN03 193 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 IQCEQ6IPM2 695 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 ANO7Q6IWH7 933 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 SCARA5Q6ZMJ2 495 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 FMNL3Q8IVF7 1028 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 CD302Q8IX05 232 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 GALNT12Q8IXK2 581 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 MINDY1Q8N5J2 469 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 UBR7Q8N806 425 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 BEST2Q8NFU1 509 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 CACTINQ8WUQ7 758 aaKnown RBP6.5□□□□□ -1.37
UBFD1-204ENST00000565634 DEPDC1BQ8WUY9 529 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 CPLX3Q8WVH0 158 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 KBTBD7Q8WVZ9 684 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 RSPH1Q8WYR4 309 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 ANKRD36BP1Q96IX9 119 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 ZNF512Q96ME7 567 aaPredicted RBP6.5□□□□□ -1.37
UBFD1-204ENST00000565634 FCRL3Q96P31 734 aaPredicted RBP6.5□□□□□ -1.37
UBFD1-204ENST00000565634 FAM83CQ9BQN1 747 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 SPON2Q9BUD6 331 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 NAA15Q9BXJ9 866 aaKnown RBP6.5□□□□□ -1.37
UBFD1-204ENST00000565634 GPR88Q9GZN0 384 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 NAT10Q9H0A0 1025 aaKnown RBP6.5□□□□□ -1.37
UBFD1-204ENST00000565634 INTS2Q9H0H0 1204 aaKnown RBP6.5□□□□□ -1.37
UBFD1-204ENST00000565634 GANQ9H2C0 597 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 DPEP3Q9H4B8 488 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 EBF3Q9H4W6 596 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 PRDM16Q9HAZ2 1276 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 METTL14Q9HCE5 456 aaKnown RBP6.5□□□□□ -1.37
UBFD1-204ENST00000565634 RAB20Q9NX57 234 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 UBQLN1Q9UMX0 589 aaKnown RBP6.5□□□□□ -1.37
UBFD1-204ENST00000565634 L1RE1Q9UN81 338 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 TSC2P49815 1807 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 ABCA12Q86UK0 2595 aa6.5□□□□□ -1.37
UBFD1-204ENST00000565634 SF3B1O75533 1304 aaKnown RBP eCLIP6.5□□□□□ -1.378e-13■■■■■ 68.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms